Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
FAM78BQ5VT40 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19■□□□□ 0.63
FAM78BQ5VT40 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 RPS2P35-201ENST00000443417 897 ntBASIC18.99■□□□□ 0.63
FAM78BQ5VT40 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FAM78BQ5VT40 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FAM78BQ5VT40 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FAM78BQ5VT40 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FAM78BQ5VT40 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
FAM78BQ5VT40 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FAM78BQ5VT40 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.98■□□□□ 0.63
FAM78BQ5VT40 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FAM78BQ5VT40 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM78BQ5VT40 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FAM78BQ5VT40 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.97■□□□□ 0.63
FAM78BQ5VT40 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM78BQ5VT40 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FAM78BQ5VT40 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM78BQ5VT40 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM78BQ5VT40 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FAM78BQ5VT40 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.96■□□□□ 0.63
FAM78BQ5VT40 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM78BQ5VT40 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.96■□□□□ 0.63
FAM78BQ5VT40 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
FAM78BQ5VT40 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM78BQ5VT40 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM78BQ5VT40 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
FAM78BQ5VT40 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.95■□□□□ 0.62
FAM78BQ5VT40 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM78BQ5VT40 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.95■□□□□ 0.62
FAM78BQ5VT40 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.95■□□□□ 0.62
FAM78BQ5VT40 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM78BQ5VT40 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FAM78BQ5VT40 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FAM78BQ5VT40 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
FAM78BQ5VT40 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FAM78BQ5VT40 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
FAM78BQ5VT40 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.94■□□□□ 0.62
FAM78BQ5VT40 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FAM78BQ5VT40 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
FAM78BQ5VT40 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FAM78BQ5VT40 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FAM78BQ5VT40 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FAM78BQ5VT40 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FAM78BQ5VT40 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.93■□□□□ 0.62
FAM78BQ5VT40 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
FAM78BQ5VT40 DUX4L29-201ENST00000425409 679 ntBASIC18.93■□□□□ 0.62
FAM78BQ5VT40 AC022211.4-201ENST00000625094 2161 ntBASIC18.93■□□□□ 0.62
FAM78BQ5VT40 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FAM78BQ5VT40 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FAM78BQ5VT40 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FAM78BQ5VT40 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.92■□□□□ 0.62
FAM78BQ5VT40 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FAM78BQ5VT40 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
FAM78BQ5VT40 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FAM78BQ5VT40 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FAM78BQ5VT40 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
FAM78BQ5VT40 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FAM78BQ5VT40 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.91■□□□□ 0.62
FAM78BQ5VT40 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FAM78BQ5VT40 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.91■□□□□ 0.62
FAM78BQ5VT40 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FAM78BQ5VT40 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.91■□□□□ 0.62
FAM78BQ5VT40 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 AC138932.3-201ENST00000567634 1902 ntBASIC18.9■□□□□ 0.62
FAM78BQ5VT40 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.9■□□□□ 0.62
FAM78BQ5VT40 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 AC021231.2-201ENST00000594613 730 ntBASIC18.9■□□□□ 0.62
FAM78BQ5VT40 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
FAM78BQ5VT40 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
FAM78BQ5VT40 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.89■□□□□ 0.61
FAM78BQ5VT40 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM78BQ5VT40 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM78BQ5VT40 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
FAM78BQ5VT40 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM78BQ5VT40 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FAM78BQ5VT40 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FAM78BQ5VT40 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FAM78BQ5VT40 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
FAM78BQ5VT40 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM78BQ5VT40 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms