Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC37.43■■■■□ 3.58
CDC42BPAQ5VT25 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC37.43■■■■□ 3.58
CDC42BPAQ5VT25 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC37.43■■■■□ 3.58
CDC42BPAQ5VT25 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC37.41■■■■□ 3.58
CDC42BPAQ5VT25 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC37.41■■■■□ 3.58
CDC42BPAQ5VT25 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC37.41■■■■□ 3.58
CDC42BPAQ5VT25 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
CDC42BPAQ5VT25 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC37.41■■■■□ 3.58
CDC42BPAQ5VT25 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC37.4■■■■□ 3.58
CDC42BPAQ5VT25 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC37.4■■■■□ 3.58
CDC42BPAQ5VT25 CREM-229ENST00000474362 1030 ntTSL 2 BASIC37.39■■■■□ 3.58
CDC42BPAQ5VT25 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC37.39■■■■□ 3.58
CDC42BPAQ5VT25 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
CDC42BPAQ5VT25 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
CDC42BPAQ5VT25 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC37.39■■■■□ 3.58
CDC42BPAQ5VT25 LONRF2P2-201ENST00000439212 571 ntBASIC37.39■■■■□ 3.58
CDC42BPAQ5VT25 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC37.39■■■■□ 3.58
CDC42BPAQ5VT25 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
CDC42BPAQ5VT25 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC37.38■■■■□ 3.57
CDC42BPAQ5VT25 ST7-205ENST00000393446 2114 ntTSL 5 BASIC37.38■■■■□ 3.57
CDC42BPAQ5VT25 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC37.38■■■■□ 3.57
CDC42BPAQ5VT25 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC37.38■■■■□ 3.57
CDC42BPAQ5VT25 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC37.38■■■■□ 3.57
CDC42BPAQ5VT25 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
CDC42BPAQ5VT25 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
CDC42BPAQ5VT25 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC37.36■■■■□ 3.57
CDC42BPAQ5VT25 ST7-202ENST00000323984 2142 ntTSL 5 BASIC37.36■■■■□ 3.57
CDC42BPAQ5VT25 ST7-207ENST00000393449 2127 ntTSL 5 BASIC37.36■■■■□ 3.57
CDC42BPAQ5VT25 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC37.36■■■■□ 3.57
CDC42BPAQ5VT25 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
CDC42BPAQ5VT25 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
CDC42BPAQ5VT25 AC239859.2-201ENST00000444165 318 ntBASIC37.35■■■■□ 3.57
CDC42BPAQ5VT25 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC37.35■■■■□ 3.57
CDC42BPAQ5VT25 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
CDC42BPAQ5VT25 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
CDC42BPAQ5VT25 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC37.33■■■■□ 3.57
CDC42BPAQ5VT25 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
CDC42BPAQ5VT25 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC37.33■■■■□ 3.57
CDC42BPAQ5VT25 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CDC42BPAQ5VT25 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CDC42BPAQ5VT25 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CDC42BPAQ5VT25 GRAMD4P7-201ENST00000578182 1232 ntBASIC37.33■■■■□ 3.57
CDC42BPAQ5VT25 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CDC42BPAQ5VT25 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC37.32■■■■□ 3.57
CDC42BPAQ5VT25 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC37.32■■■■□ 3.56
CDC42BPAQ5VT25 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC37.32■■■■□ 3.56
CDC42BPAQ5VT25 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC37.32■■■■□ 3.56
CDC42BPAQ5VT25 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC37.32■■■■□ 3.56
CDC42BPAQ5VT25 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
CDC42BPAQ5VT25 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
CDC42BPAQ5VT25 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC37.31■■■■□ 3.56
CDC42BPAQ5VT25 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC37.31■■■■□ 3.56
CDC42BPAQ5VT25 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC37.3■■■■□ 3.56
CDC42BPAQ5VT25 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
CDC42BPAQ5VT25 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC37.29■■■■□ 3.56
CDC42BPAQ5VT25 LINC01003-201ENST00000564834 1764 ntBASIC37.29■■■■□ 3.56
CDC42BPAQ5VT25 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC37.28■■■■□ 3.56
CDC42BPAQ5VT25 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC37.28■■■■□ 3.56
CDC42BPAQ5VT25 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC37.28■■■■□ 3.56
CDC42BPAQ5VT25 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC37.27■■■■□ 3.56
CDC42BPAQ5VT25 LSM7-203ENST00000585409 512 ntTSL 2 BASIC37.27■■■■□ 3.56
CDC42BPAQ5VT25 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC37.27■■■■□ 3.56
CDC42BPAQ5VT25 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
CDC42BPAQ5VT25 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
CDC42BPAQ5VT25 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC37.26■■■■□ 3.56
CDC42BPAQ5VT25 UNC93B8-201ENST00000511903 705 ntBASIC37.26■■■■□ 3.56
CDC42BPAQ5VT25 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC37.26■■■■□ 3.56
CDC42BPAQ5VT25 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.55
CDC42BPAQ5VT25 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC37.25■■■■□ 3.55
CDC42BPAQ5VT25 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
CDC42BPAQ5VT25 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC37.25■■■■□ 3.55
CDC42BPAQ5VT25 AC022616.5-201ENST00000518796 181 ntBASIC37.25■■■■□ 3.55
CDC42BPAQ5VT25 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
CDC42BPAQ5VT25 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC37.25■■■■□ 3.55
CDC42BPAQ5VT25 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
CDC42BPAQ5VT25 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC37.24■■■■□ 3.55
CDC42BPAQ5VT25 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC37.24■■■■□ 3.55
CDC42BPAQ5VT25 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
CDC42BPAQ5VT25 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC37.24■■■■□ 3.55
CDC42BPAQ5VT25 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC37.24■■■■□ 3.55
CDC42BPAQ5VT25 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC37.24■■■■□ 3.55
CDC42BPAQ5VT25 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC37.24■■■■□ 3.55
CDC42BPAQ5VT25 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC37.23■■■■□ 3.55
CDC42BPAQ5VT25 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
CDC42BPAQ5VT25 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
CDC42BPAQ5VT25 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
CDC42BPAQ5VT25 BX664725.1-201ENST00000438252 379 ntBASIC37.22■■■■□ 3.55
CDC42BPAQ5VT25 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
CDC42BPAQ5VT25 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
CDC42BPAQ5VT25 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
CDC42BPAQ5VT25 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC37.21■■■■□ 3.55
CDC42BPAQ5VT25 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC37.21■■■■□ 3.55
CDC42BPAQ5VT25 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC37.21■■■■□ 3.55
CDC42BPAQ5VT25 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC37.2■■■■□ 3.55
CDC42BPAQ5VT25 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC37.2■■■■□ 3.55
CDC42BPAQ5VT25 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
CDC42BPAQ5VT25 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
CDC42BPAQ5VT25 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC37.18■■■■□ 3.54
CDC42BPAQ5VT25 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC37.18■■■■□ 3.54
CDC42BPAQ5VT25 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC37.18■■■■□ 3.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms