Protein–RNA interactions for Protein: P80188

LCN2, Neutrophil gelatinase-associated lipocalin, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2P80188 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCN2P80188 BX255925.1-201ENST00000566954 1854 ntBASIC20.22■□□□□ 0.83
LCN2P80188 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCN2P80188 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCN2P80188 MIR6765-201ENST00000614092 87 ntBASIC20.22■□□□□ 0.83
LCN2P80188 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCN2P80188 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCN2P80188 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
LCN2P80188 RARRES2P1-201ENST00000474487 481 ntBASIC20.21■□□□□ 0.83
LCN2P80188 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.21■□□□□ 0.83
LCN2P80188 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCN2P80188 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LCN2P80188 AC139795.1-202ENST00000500444 432 ntBASIC20.2■□□□□ 0.82
LCN2P80188 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.2■□□□□ 0.82
LCN2P80188 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCN2P80188 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.2■□□□□ 0.82
LCN2P80188 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCN2P80188 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCN2P80188 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LCN2P80188 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCN2P80188 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCN2P80188 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCN2P80188 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCN2P80188 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LCN2P80188 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCN2P80188 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCN2P80188 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCN2P80188 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.18■□□□□ 0.82
LCN2P80188 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCN2P80188 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCN2P80188 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCN2P80188 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.17■□□□□ 0.82
LCN2P80188 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCN2P80188 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.17■□□□□ 0.82
LCN2P80188 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCN2P80188 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LCN2P80188 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.16■□□□□ 0.82
LCN2P80188 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LCN2P80188 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LCN2P80188 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCN2P80188 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCN2P80188 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.16■□□□□ 0.82
LCN2P80188 AC010980.1-201ENST00000587192 1142 ntBASIC20.16■□□□□ 0.82
LCN2P80188 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCN2P80188 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.16■□□□□ 0.82
LCN2P80188 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCN2P80188 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCN2P80188 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCN2P80188 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCN2P80188 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LCN2P80188 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCN2P80188 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCN2P80188 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.15■□□□□ 0.82
LCN2P80188 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LCN2P80188 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
LCN2P80188 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LCN2P80188 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.14■□□□□ 0.81
LCN2P80188 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.14■□□□□ 0.81
LCN2P80188 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCN2P80188 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LCN2P80188 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.13■□□□□ 0.81
LCN2P80188 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
LCN2P80188 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCN2P80188 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.12■□□□□ 0.81
LCN2P80188 KRT8P33-201ENST00000508125 1423 ntBASIC20.12■□□□□ 0.81
LCN2P80188 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCN2P80188 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.12■□□□□ 0.81
LCN2P80188 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.12■□□□□ 0.81
LCN2P80188 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LCN2P80188 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LCN2P80188 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCN2P80188 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LCN2P80188 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LCN2P80188 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
LCN2P80188 AC074183.2-201ENST00000623112 922 ntBASIC20.1■□□□□ 0.81
LCN2P80188 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.1■□□□□ 0.81
LCN2P80188 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
LCN2P80188 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
LCN2P80188 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LCN2P80188 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCN2P80188 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.09■□□□□ 0.81
LCN2P80188 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCN2P80188 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCN2P80188 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.09■□□□□ 0.81
LCN2P80188 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.09■□□□□ 0.81
LCN2P80188 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.09■□□□□ 0.81
LCN2P80188 AP004609.3-201ENST00000610705 1884 ntBASIC20.09■□□□□ 0.81
LCN2P80188 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.09■□□□□ 0.81
LCN2P80188 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCN2P80188 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCN2P80188 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LCN2P80188 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCN2P80188 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LCN2P80188 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LCN2P80188 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LCN2P80188 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LCN2P80188 AC142472.1-201ENST00000612013 1741 ntBASIC20.08■□□□□ 0.81
LCN2P80188 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.08■□□□□ 0.81
LCN2P80188 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LCN2P80188 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms