Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.2■□□□□ 0.98
CCR9P51686 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCR9P51686 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCR9P51686 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCR9P51686 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.19■□□□□ 0.98
CCR9P51686 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCR9P51686 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CCR9P51686 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.19■□□□□ 0.98
CCR9P51686 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCR9P51686 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCR9P51686 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCR9P51686 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCR9P51686 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.18■□□□□ 0.98
CCR9P51686 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCR9P51686 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCR9P51686 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCR9P51686 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCR9P51686 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCR9P51686 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.17■□□□□ 0.98
CCR9P51686 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.17■□□□□ 0.98
CCR9P51686 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCR9P51686 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCR9P51686 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCR9P51686 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.16■□□□□ 0.98
CCR9P51686 AC096887.2-201ENST00000623443 1957 ntBASIC21.16■□□□□ 0.98
CCR9P51686 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCR9P51686 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCR9P51686 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.16■□□□□ 0.98
CCR9P51686 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCR9P51686 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.15■□□□□ 0.98
CCR9P51686 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.15■□□□□ 0.98
CCR9P51686 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCR9P51686 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCR9P51686 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCR9P51686 AC022211.4-201ENST00000625094 2161 ntBASIC21.14■□□□□ 0.98
CCR9P51686 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCR9P51686 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCR9P51686 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCR9P51686 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CCR9P51686 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCR9P51686 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCR9P51686 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.14■□□□□ 0.97
CCR9P51686 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCR9P51686 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCR9P51686 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.14■□□□□ 0.97
CCR9P51686 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCR9P51686 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCR9P51686 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCR9P51686 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCR9P51686 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCR9P51686 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCR9P51686 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CCR9P51686 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.13■□□□□ 0.97
CCR9P51686 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.13■□□□□ 0.97
CCR9P51686 AL359258.2-201ENST00000564063 1566 ntBASIC21.13■□□□□ 0.97
CCR9P51686 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCR9P51686 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CCR9P51686 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCR9P51686 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCR9P51686 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCR9P51686 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCR9P51686 DUX4L11-201ENST00000611504 1267 ntBASIC21.12■□□□□ 0.97
CCR9P51686 DUX4L12-201ENST00000614593 1267 ntBASIC21.12■□□□□ 0.97
CCR9P51686 DUX4L14-201ENST00000621227 1267 ntBASIC21.12■□□□□ 0.97
CCR9P51686 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCR9P51686 AL359504.2-201ENST00000605506 1601 ntBASIC21.11■□□□□ 0.97
CCR9P51686 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCR9P51686 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCR9P51686 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCR9P51686 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCR9P51686 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCR9P51686 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCR9P51686 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCR9P51686 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.1■□□□□ 0.97
CCR9P51686 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCR9P51686 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCR9P51686 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCR9P51686 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCR9P51686 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCR9P51686 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.1■□□□□ 0.97
CCR9P51686 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCR9P51686 AC138932.3-201ENST00000567634 1902 ntBASIC21.1■□□□□ 0.97
CCR9P51686 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.1■□□□□ 0.97
CCR9P51686 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CCR9P51686 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCR9P51686 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCR9P51686 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCR9P51686 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCR9P51686 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CCR9P51686 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCR9P51686 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCR9P51686 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCR9P51686 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCR9P51686 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.09■□□□□ 0.97
CCR9P51686 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCR9P51686 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCR9P51686 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCR9P51686 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCR9P51686 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCR9P51686 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms