Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.02■□□□□ 0.79
CTSDP07339 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTSDP07339 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTSDP07339 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTSDP07339 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTSDP07339 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CTSDP07339 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CTSDP07339 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTSDP07339 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.01■□□□□ 0.79
CTSDP07339 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTSDP07339 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTSDP07339 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20■□□□□ 0.79
CTSDP07339 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTSDP07339 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20■□□□□ 0.79
CTSDP07339 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20■□□□□ 0.79
CTSDP07339 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTSDP07339 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CTSDP07339 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CTSDP07339 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20■□□□□ 0.79
CTSDP07339 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CTSDP07339 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CTSDP07339 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTSDP07339 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTSDP07339 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTSDP07339 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTSDP07339 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTSDP07339 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTSDP07339 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTSDP07339 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTSDP07339 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTSDP07339 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CTSDP07339 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTSDP07339 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.99■□□□□ 0.79
CTSDP07339 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSDP07339 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSDP07339 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CTSDP07339 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTSDP07339 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.98■□□□□ 0.79
CTSDP07339 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSDP07339 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSDP07339 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CTSDP07339 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTSDP07339 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTSDP07339 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTSDP07339 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CTSDP07339 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTSDP07339 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTSDP07339 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSDP07339 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSDP07339 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.96■□□□□ 0.79
CTSDP07339 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTSDP07339 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.96■□□□□ 0.79
CTSDP07339 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSDP07339 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTSDP07339 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CTSDP07339 AP006261.1-201ENST00000584783 668 ntBASIC19.95■□□□□ 0.78
CTSDP07339 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTSDP07339 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTSDP07339 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTSDP07339 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTSDP07339 AP003733.4-201ENST00000623785 1697 ntBASIC19.94■□□□□ 0.78
CTSDP07339 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTSDP07339 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTSDP07339 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.94■□□□□ 0.78
CTSDP07339 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTSDP07339 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTSDP07339 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSDP07339 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CTSDP07339 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSDP07339 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSDP07339 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.93■□□□□ 0.78
CTSDP07339 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSDP07339 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CTSDP07339 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.92■□□□□ 0.78
CTSDP07339 LINC01124-201ENST00000409786 2117 ntBASIC19.92■□□□□ 0.78
CTSDP07339 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.92■□□□□ 0.78
CTSDP07339 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.92■□□□□ 0.78
CTSDP07339 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
CTSDP07339 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSDP07339 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSDP07339 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSDP07339 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.91■□□□□ 0.78
CTSDP07339 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTSDP07339 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTSDP07339 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CTSDP07339 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CTSDP07339 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSDP07339 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CTSDP07339 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.9■□□□□ 0.78
CTSDP07339 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTSDP07339 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSDP07339 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSDP07339 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.9■□□□□ 0.78
CTSDP07339 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.9■□□□□ 0.78
CTSDP07339 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTSDP07339 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTSDP07339 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSDP07339 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSDP07339 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSDP07339 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms