Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-AP01891 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
HLA-AP01891 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-AP01891 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.27■□□□□ 0.84
HLA-AP01891 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.27■□□□□ 0.84
HLA-AP01891 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-AP01891 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
HLA-AP01891 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-AP01891 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-AP01891 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-AP01891 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HLA-AP01891 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
HLA-AP01891 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-AP01891 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-AP01891 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-AP01891 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-AP01891 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.26■□□□□ 0.83
HLA-AP01891 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-AP01891 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.26■□□□□ 0.83
HLA-AP01891 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-AP01891 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-AP01891 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-AP01891 WHAMMP3-201ENST00000611636 1609 ntBASIC20.25■□□□□ 0.83
HLA-AP01891 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-AP01891 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.24■□□□□ 0.83
HLA-AP01891 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-AP01891 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.24■□□□□ 0.83
HLA-AP01891 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-AP01891 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-AP01891 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-AP01891 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HLA-AP01891 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-AP01891 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-AP01891 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-AP01891 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-AP01891 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-AP01891 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
HLA-AP01891 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.23■□□□□ 0.83
HLA-AP01891 LINC00273-201ENST00000539813 1452 ntBASIC20.23■□□□□ 0.83
HLA-AP01891 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-AP01891 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-AP01891 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.22■□□□□ 0.83
HLA-AP01891 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.22■□□□□ 0.83
HLA-AP01891 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-AP01891 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
HLA-AP01891 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-AP01891 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-AP01891 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-AP01891 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-AP01891 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-AP01891 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-AP01891 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-AP01891 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-AP01891 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HLA-AP01891 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
HLA-AP01891 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-AP01891 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-AP01891 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
HLA-AP01891 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-AP01891 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-AP01891 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-AP01891 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-AP01891 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-AP01891 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-AP01891 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.2■□□□□ 0.82
HLA-AP01891 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-AP01891 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-AP01891 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-AP01891 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.19■□□□□ 0.82
HLA-AP01891 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-AP01891 RPS2P35-201ENST00000443417 897 ntBASIC20.19■□□□□ 0.82
HLA-AP01891 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HLA-AP01891 AC087741.3-201ENST00000624270 1347 ntBASIC20.19■□□□□ 0.82
HLA-AP01891 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-AP01891 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-AP01891 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HLA-AP01891 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.18■□□□□ 0.82
HLA-AP01891 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-AP01891 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-AP01891 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-AP01891 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-AP01891 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-AP01891 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-AP01891 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-AP01891 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-AP01891 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-AP01891 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HLA-AP01891 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-AP01891 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HLA-AP01891 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-AP01891 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-AP01891 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-AP01891 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-AP01891 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-AP01891 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-AP01891 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-AP01891 AC068473.5-201ENST00000616428 2072 ntBASIC20.15■□□□□ 0.82
HLA-AP01891 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-AP01891 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HLA-AP01891 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms