Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
RAB3DO95716 AC005559.1-201ENST00000589661 871 ntBASIC20.46■□□□□ 0.87
RAB3DO95716 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB3DO95716 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RAB3DO95716 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB3DO95716 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
RAB3DO95716 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB3DO95716 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB3DO95716 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB3DO95716 AC110285.7-201ENST00000624417 1536 ntBASIC20.45■□□□□ 0.86
RAB3DO95716 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB3DO95716 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RAB3DO95716 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB3DO95716 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.44■□□□□ 0.86
RAB3DO95716 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB3DO95716 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RAB3DO95716 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB3DO95716 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RAB3DO95716 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RAB3DO95716 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB3DO95716 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.44■□□□□ 0.86
RAB3DO95716 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RAB3DO95716 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB3DO95716 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB3DO95716 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3DO95716 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3DO95716 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
RAB3DO95716 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3DO95716 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3DO95716 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB3DO95716 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3DO95716 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3DO95716 AC012676.1-201ENST00000574705 1949 ntBASIC20.41■□□□□ 0.86
RAB3DO95716 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3DO95716 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3DO95716 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3DO95716 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RAB3DO95716 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3DO95716 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB3DO95716 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB3DO95716 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB3DO95716 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB3DO95716 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB3DO95716 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB3DO95716 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB3DO95716 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB3DO95716 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB3DO95716 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB3DO95716 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB3DO95716 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3DO95716 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3DO95716 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3DO95716 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB3DO95716 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3DO95716 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3DO95716 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3DO95716 AC096887.2-201ENST00000623443 1957 ntBASIC20.37■□□□□ 0.85
RAB3DO95716 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB3DO95716 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB3DO95716 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3DO95716 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB3DO95716 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RAB3DO95716 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB3DO95716 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3DO95716 LINC01124-201ENST00000409786 2117 ntBASIC20.37■□□□□ 0.85
RAB3DO95716 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB3DO95716 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3DO95716 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3DO95716 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB3DO95716 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB3DO95716 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3DO95716 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3DO95716 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RAB3DO95716 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3DO95716 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
RAB3DO95716 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3DO95716 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3DO95716 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3DO95716 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3DO95716 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3DO95716 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3DO95716 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3DO95716 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3DO95716 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
RAB3DO95716 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3DO95716 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RAB3DO95716 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.34■□□□□ 0.85
RAB3DO95716 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3DO95716 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3DO95716 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.34■□□□□ 0.85
RAB3DO95716 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.34■□□□□ 0.85
RAB3DO95716 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3DO95716 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3DO95716 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAB3DO95716 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.33■□□□□ 0.85
RAB3DO95716 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAB3DO95716 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAB3DO95716 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.33■□□□□ 0.85
RAB3DO95716 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAB3DO95716 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms