Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
SUPT3HO75486 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SUPT3HO75486 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SUPT3HO75486 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SUPT3HO75486 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SUPT3HO75486 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.81■■□□□ 1.4
SUPT3HO75486 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SUPT3HO75486 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SUPT3HO75486 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SUPT3HO75486 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SUPT3HO75486 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.8■■□□□ 1.4
SUPT3HO75486 MIR7108-201ENST00000614319 87 ntBASIC23.8■■□□□ 1.4
SUPT3HO75486 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SUPT3HO75486 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SUPT3HO75486 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SUPT3HO75486 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SUPT3HO75486 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SUPT3HO75486 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.78■■□□□ 1.4
SUPT3HO75486 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SUPT3HO75486 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SUPT3HO75486 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SUPT3HO75486 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SUPT3HO75486 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SUPT3HO75486 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SUPT3HO75486 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.76■■□□□ 1.39
SUPT3HO75486 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.76■■□□□ 1.39
SUPT3HO75486 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SUPT3HO75486 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SUPT3HO75486 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SUPT3HO75486 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.76■■□□□ 1.39
SUPT3HO75486 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
SUPT3HO75486 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SUPT3HO75486 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SUPT3HO75486 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SUPT3HO75486 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SUPT3HO75486 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SUPT3HO75486 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.75■■□□□ 1.39
SUPT3HO75486 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.75■■□□□ 1.39
SUPT3HO75486 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SUPT3HO75486 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SUPT3HO75486 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SUPT3HO75486 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.74■■□□□ 1.39
SUPT3HO75486 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SUPT3HO75486 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SUPT3HO75486 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.74■■□□□ 1.39
SUPT3HO75486 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SUPT3HO75486 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
SUPT3HO75486 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SUPT3HO75486 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SUPT3HO75486 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.73■■□□□ 1.39
SUPT3HO75486 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
SUPT3HO75486 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SUPT3HO75486 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SUPT3HO75486 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.72■■□□□ 1.39
SUPT3HO75486 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.72■■□□□ 1.39
SUPT3HO75486 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.72■■□□□ 1.39
SUPT3HO75486 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SUPT3HO75486 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.72■■□□□ 1.39
SUPT3HO75486 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SUPT3HO75486 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SUPT3HO75486 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SUPT3HO75486 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.71■■□□□ 1.39
SUPT3HO75486 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SUPT3HO75486 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SUPT3HO75486 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SUPT3HO75486 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
SUPT3HO75486 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.7■■□□□ 1.39
SUPT3HO75486 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SUPT3HO75486 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SUPT3HO75486 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SUPT3HO75486 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
SUPT3HO75486 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SUPT3HO75486 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SUPT3HO75486 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SUPT3HO75486 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
SUPT3HO75486 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.68■■□□□ 1.38
SUPT3HO75486 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SUPT3HO75486 AC096887.2-201ENST00000623443 1957 ntBASIC23.68■■□□□ 1.38
SUPT3HO75486 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SUPT3HO75486 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SUPT3HO75486 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SUPT3HO75486 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SUPT3HO75486 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SUPT3HO75486 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SUPT3HO75486 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SUPT3HO75486 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SUPT3HO75486 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SUPT3HO75486 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SUPT3HO75486 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SUPT3HO75486 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.67■■□□□ 1.38
SUPT3HO75486 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SUPT3HO75486 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
SUPT3HO75486 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SUPT3HO75486 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
SUPT3HO75486 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SUPT3HO75486 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
SUPT3HO75486 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SUPT3HO75486 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SUPT3HO75486 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SUPT3HO75486 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms