Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
GRIN3BO60391 MIR4466-201ENST00000606121 54 ntBASIC30.3■■■□□ 2.44
GRIN3BO60391 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
GRIN3BO60391 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.29■■■□□ 2.44
GRIN3BO60391 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
GRIN3BO60391 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
GRIN3BO60391 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
GRIN3BO60391 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
GRIN3BO60391 MIR6724-1-201ENST00000616420 92 ntBASIC30.27■■■□□ 2.44
GRIN3BO60391 MIR6724-2-201ENST00000616483 92 ntBASIC30.27■■■□□ 2.44
GRIN3BO60391 MIR6724-4-201ENST00000617390 92 ntBASIC30.27■■■□□ 2.44
GRIN3BO60391 MIR6724-3-201ENST00000622482 92 ntBASIC30.27■■■□□ 2.44
GRIN3BO60391 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
GRIN3BO60391 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.26■■■□□ 2.43
GRIN3BO60391 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
GRIN3BO60391 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
GRIN3BO60391 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
GRIN3BO60391 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.25■■■□□ 2.43
GRIN3BO60391 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
GRIN3BO60391 AC010997.5-201ENST00000609182 354 ntBASIC30.25■■■□□ 2.43
GRIN3BO60391 AC106739.1-201ENST00000617035 715 ntBASIC30.25■■■□□ 2.43
GRIN3BO60391 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
GRIN3BO60391 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
GRIN3BO60391 AL359504.2-201ENST00000605506 1601 ntBASIC30.25■■■□□ 2.43
GRIN3BO60391 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
GRIN3BO60391 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
GRIN3BO60391 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.24■■■□□ 2.43
GRIN3BO60391 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
GRIN3BO60391 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.24■■■□□ 2.43
GRIN3BO60391 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.23■■■□□ 2.43
GRIN3BO60391 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
GRIN3BO60391 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
GRIN3BO60391 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
GRIN3BO60391 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
GRIN3BO60391 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
GRIN3BO60391 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
GRIN3BO60391 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
GRIN3BO60391 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
GRIN3BO60391 PBX2P1-201ENST00000493219 1291 ntBASIC30.21■■■□□ 2.43
GRIN3BO60391 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.21■■■□□ 2.43
GRIN3BO60391 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
GRIN3BO60391 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.2■■■□□ 2.43
GRIN3BO60391 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.2■■■□□ 2.43
GRIN3BO60391 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
GRIN3BO60391 AP004833.2-201ENST00000532228 1454 ntBASIC30.19■■■□□ 2.42
GRIN3BO60391 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
GRIN3BO60391 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
GRIN3BO60391 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
GRIN3BO60391 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
GRIN3BO60391 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
GRIN3BO60391 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
GRIN3BO60391 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
GRIN3BO60391 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
GRIN3BO60391 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
GRIN3BO60391 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
GRIN3BO60391 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.16■■■□□ 2.42
GRIN3BO60391 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
GRIN3BO60391 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
GRIN3BO60391 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.15■■■□□ 2.42
GRIN3BO60391 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.15■■■□□ 2.42
GRIN3BO60391 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
GRIN3BO60391 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
GRIN3BO60391 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.14■■■□□ 2.42
GRIN3BO60391 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
GRIN3BO60391 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
GRIN3BO60391 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
GRIN3BO60391 AC120024.1-201ENST00000562672 995 ntBASIC30.13■■■□□ 2.41
GRIN3BO60391 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
GRIN3BO60391 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.12■■■□□ 2.41
GRIN3BO60391 AC100797.4-201ENST00000631653 1827 ntBASIC30.12■■■□□ 2.41
GRIN3BO60391 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
GRIN3BO60391 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
GRIN3BO60391 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
GRIN3BO60391 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.11■■■□□ 2.41
GRIN3BO60391 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
GRIN3BO60391 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
GRIN3BO60391 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
GRIN3BO60391 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
GRIN3BO60391 KRT18P10-201ENST00000388836 1287 ntBASIC30.11■■■□□ 2.41
GRIN3BO60391 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.11■■■□□ 2.41
GRIN3BO60391 SUDS3P1-201ENST00000505831 966 ntBASIC30.11■■■□□ 2.41
GRIN3BO60391 MTDHP2-201ENST00000601468 714 ntBASIC30.11■■■□□ 2.41
GRIN3BO60391 AL512631.2-201ENST00000604634 923 ntBASIC30.11■■■□□ 2.41
GRIN3BO60391 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
GRIN3BO60391 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.1■■■□□ 2.41
GRIN3BO60391 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.1■■■□□ 2.41
GRIN3BO60391 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.1■■■□□ 2.41
GRIN3BO60391 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.09■■■□□ 2.41
GRIN3BO60391 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.09■■■□□ 2.41
GRIN3BO60391 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
GRIN3BO60391 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
GRIN3BO60391 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
GRIN3BO60391 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.08■■■□□ 2.41
GRIN3BO60391 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.08■■■□□ 2.41
GRIN3BO60391 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.08■■■□□ 2.41
GRIN3BO60391 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC30.07■■■□□ 2.4
GRIN3BO60391 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.06■■■□□ 2.4
GRIN3BO60391 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.06■■■□□ 2.4
GRIN3BO60391 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.06■■■□□ 2.4
GRIN3BO60391 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms