Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.33■■□□□ 1.33
NTN3O00634 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.33■■□□□ 1.33
NTN3O00634 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.33■■□□□ 1.33
NTN3O00634 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.33■■□□□ 1.33
NTN3O00634 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NTN3O00634 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.32■■□□□ 1.32
NTN3O00634 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NTN3O00634 KRT18P10-201ENST00000388836 1287 ntBASIC23.32■■□□□ 1.32
NTN3O00634 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NTN3O00634 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
NTN3O00634 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NTN3O00634 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NTN3O00634 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NTN3O00634 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NTN3O00634 Z92544.1-202ENST00000571933 1220 ntBASIC23.31■■□□□ 1.32
NTN3O00634 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.31■■□□□ 1.32
NTN3O00634 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NTN3O00634 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NTN3O00634 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
NTN3O00634 LINC01003-201ENST00000564834 1764 ntBASIC23.3■■□□□ 1.32
NTN3O00634 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NTN3O00634 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NTN3O00634 AL356441.2-201ENST00000443009 864 ntBASIC23.3■■□□□ 1.32
NTN3O00634 AC239859.2-201ENST00000444165 318 ntBASIC23.3■■□□□ 1.32
NTN3O00634 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.3■■□□□ 1.32
NTN3O00634 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NTN3O00634 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NTN3O00634 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
NTN3O00634 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.29■■□□□ 1.32
NTN3O00634 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.28■■□□□ 1.32
NTN3O00634 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NTN3O00634 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.28■■□□□ 1.32
NTN3O00634 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.28■■□□□ 1.32
NTN3O00634 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NTN3O00634 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
NTN3O00634 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NTN3O00634 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.27■■□□□ 1.32
NTN3O00634 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.27■■□□□ 1.32
NTN3O00634 AC022616.5-201ENST00000518796 181 ntBASIC23.27■■□□□ 1.32
NTN3O00634 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
NTN3O00634 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NTN3O00634 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NTN3O00634 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NTN3O00634 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NTN3O00634 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NTN3O00634 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
NTN3O00634 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NTN3O00634 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
NTN3O00634 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.25■■□□□ 1.31
NTN3O00634 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NTN3O00634 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NTN3O00634 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NTN3O00634 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NTN3O00634 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NTN3O00634 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NTN3O00634 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.24■■□□□ 1.31
NTN3O00634 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
NTN3O00634 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NTN3O00634 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NTN3O00634 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.23■■□□□ 1.31
NTN3O00634 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.23■■□□□ 1.31
NTN3O00634 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
NTN3O00634 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NTN3O00634 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NTN3O00634 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
NTN3O00634 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NTN3O00634 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NTN3O00634 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
NTN3O00634 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.22■■□□□ 1.31
NTN3O00634 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NTN3O00634 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NTN3O00634 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
NTN3O00634 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
NTN3O00634 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NTN3O00634 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NTN3O00634 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.21■■□□□ 1.31
NTN3O00634 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NTN3O00634 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.21■■□□□ 1.31
NTN3O00634 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NTN3O00634 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.21■■□□□ 1.31
NTN3O00634 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.21■■□□□ 1.31
NTN3O00634 BX255925.1-201ENST00000566954 1854 ntBASIC23.2■■□□□ 1.3
NTN3O00634 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NTN3O00634 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NTN3O00634 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NTN3O00634 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NTN3O00634 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
NTN3O00634 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NTN3O00634 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.2■■□□□ 1.3
NTN3O00634 AC139426.1-201ENST00000568218 2529 ntBASIC23.2■■□□□ 1.3
NTN3O00634 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.2■■□□□ 1.3
NTN3O00634 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NTN3O00634 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NTN3O00634 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NTN3O00634 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
NTN3O00634 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NTN3O00634 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
NTN3O00634 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.19■■□□□ 1.3
NTN3O00634 KRT18P24-201ENST00000344739 1156 ntBASIC23.18■■□□□ 1.3
NTN3O00634 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms