Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC36.32■■■■□ 3.4
HFM1A2PYH4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
HFM1A2PYH4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC36.31■■■■□ 3.4
HFM1A2PYH4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC36.31■■■■□ 3.4
HFM1A2PYH4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
HFM1A2PYH4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC36.31■■■■□ 3.4
HFM1A2PYH4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC36.3■■■■□ 3.4
HFM1A2PYH4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC36.29■■■■□ 3.4
HFM1A2PYH4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
HFM1A2PYH4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC36.28■■■■□ 3.4
HFM1A2PYH4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
HFM1A2PYH4 AL121749.1-202ENST00000609313 2153 ntBASIC36.28■■■■□ 3.4
HFM1A2PYH4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC36.27■■■■□ 3.4
HFM1A2PYH4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC36.27■■■■□ 3.4
HFM1A2PYH4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
HFM1A2PYH4 DUX4L18-201ENST00000553347 1267 ntBASIC36.27■■■■□ 3.4
HFM1A2PYH4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
HFM1A2PYH4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC36.26■■■■□ 3.4
HFM1A2PYH4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC36.26■■■■□ 3.4
HFM1A2PYH4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
HFM1A2PYH4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC36.26■■■■□ 3.39
HFM1A2PYH4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC36.25■■■■□ 3.39
HFM1A2PYH4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
HFM1A2PYH4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC36.24■■■■□ 3.39
HFM1A2PYH4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC36.24■■■■□ 3.39
HFM1A2PYH4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC36.24■■■■□ 3.39
HFM1A2PYH4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC36.24■■■■□ 3.39
HFM1A2PYH4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
HFM1A2PYH4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC36.24■■■■□ 3.39
HFM1A2PYH4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
HFM1A2PYH4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC36.22■■■■□ 3.39
HFM1A2PYH4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC36.22■■■■□ 3.39
HFM1A2PYH4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC36.22■■■■□ 3.39
HFM1A2PYH4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC36.22■■■■□ 3.39
HFM1A2PYH4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
HFM1A2PYH4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
HFM1A2PYH4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
HFM1A2PYH4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC36.21■■■■□ 3.39
HFM1A2PYH4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC36.21■■■■□ 3.39
HFM1A2PYH4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC36.21■■■■□ 3.39
HFM1A2PYH4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC36.21■■■■□ 3.39
HFM1A2PYH4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
HFM1A2PYH4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC36.2■■■■□ 3.39
HFM1A2PYH4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC36.2■■■■□ 3.39
HFM1A2PYH4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC36.19■■■■□ 3.38
HFM1A2PYH4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC36.19■■■■□ 3.38
HFM1A2PYH4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
HFM1A2PYH4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC36.19■■■■□ 3.38
HFM1A2PYH4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
HFM1A2PYH4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC36.18■■■■□ 3.38
HFM1A2PYH4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC36.18■■■■□ 3.38
HFM1A2PYH4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC36.18■■■■□ 3.38
HFM1A2PYH4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
HFM1A2PYH4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
HFM1A2PYH4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC36.17■■■■□ 3.38
HFM1A2PYH4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
HFM1A2PYH4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
HFM1A2PYH4 AC018755.3-202ENST00000596210 929 ntBASIC36.17■■■■□ 3.38
HFM1A2PYH4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
HFM1A2PYH4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC36.16■■■■□ 3.38
HFM1A2PYH4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC36.16■■■■□ 3.38
HFM1A2PYH4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
HFM1A2PYH4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC36.16■■■■□ 3.38
HFM1A2PYH4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
HFM1A2PYH4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC36.15■■■■□ 3.38
HFM1A2PYH4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC36.15■■■■□ 3.38
HFM1A2PYH4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
HFM1A2PYH4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC36.14■■■■□ 3.38
HFM1A2PYH4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
HFM1A2PYH4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC36.14■■■■□ 3.38
HFM1A2PYH4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC36.13■■■■□ 3.38
HFM1A2PYH4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
HFM1A2PYH4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC36.13■■■■□ 3.37
HFM1A2PYH4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC36.13■■■■□ 3.37
HFM1A2PYH4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC36.13■■■■□ 3.37
HFM1A2PYH4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC36.13■■■■□ 3.37
HFM1A2PYH4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC36.13■■■■□ 3.37
HFM1A2PYH4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
HFM1A2PYH4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
HFM1A2PYH4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
HFM1A2PYH4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC36.11■■■■□ 3.37
HFM1A2PYH4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC36.11■■■■□ 3.37
HFM1A2PYH4 AC087393.1-201ENST00000582896 145 ntBASIC36.11■■■■□ 3.37
HFM1A2PYH4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC36.11■■■■□ 3.37
HFM1A2PYH4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC36.1■■■■□ 3.37
HFM1A2PYH4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC36.1■■■■□ 3.37
HFM1A2PYH4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC36.09■■■■□ 3.37
HFM1A2PYH4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
HFM1A2PYH4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
HFM1A2PYH4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC36.08■■■■□ 3.37
HFM1A2PYH4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
HFM1A2PYH4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
HFM1A2PYH4 RPS2P7-201ENST00000447334 885 ntBASIC36.08■■■■□ 3.37
HFM1A2PYH4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC36.08■■■■□ 3.37
HFM1A2PYH4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
HFM1A2PYH4 PVT1_1.1-201ENST00000615125 194 ntBASIC36.07■■■■□ 3.36
HFM1A2PYH4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
HFM1A2PYH4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
HFM1A2PYH4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
HFM1A2PYH4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms