Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.371e-18■■□□□ 11.5
MATR3P43243 FNDC3B-206ENST00000443501 678 ntTSL 38.47□□□□□ -1.052e-6■■□□□ 11.5
MATR3P43243 SLC12A4-208ENST00000572010 1016 ntTSL 1 (best)23.19■■□□□ 1.32e-11■■□□□ 11.5
MATR3P43243 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.03■■□□□ 1.122e-11■■□□□ 11.5
MATR3P43243 SLC12A4-217ENST00000576462 673 ntTSL 221.68■■□□□ 1.062e-11■■□□□ 11.5
MATR3P43243 SLC12A4-212ENST00000573023 3649 ntTSL 521.16■□□□□ 0.982e-11■■□□□ 11.5
MATR3P43243 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.952e-11■■□□□ 11.5
MATR3P43243 SLC12A4-207ENST00000571299 891 ntTSL 317.07■□□□□ 0.322e-11■■□□□ 11.5
MATR3P43243 SLC12A4-216ENST00000576377 868 ntTSL 515.3■□□□□ 0.042e-11■■□□□ 11.5
MATR3P43243 SLC12A4-203ENST00000537830 3525 ntTSL 2 BASIC13.12□□□□□ -0.312e-11■■□□□ 11.5
MATR3P43243 SLC12A4-204ENST00000541864 3627 ntTSL 2 BASIC13.08□□□□□ -0.312e-11■■□□□ 11.5
MATR3P43243 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC13.02□□□□□ -0.332e-11■■□□□ 11.5
MATR3P43243 SLC12A4-219ENST00000576616 3768 ntTSL 2 BASIC12.48□□□□□ -0.412e-11■■□□□ 11.5
MATR3P43243 SLC12A4-206ENST00000570802 3761 ntTSL 212.27□□□□□ -0.452e-11■■□□□ 11.5
MATR3P43243 ENPP1-203ENST00000486853 732 ntTSL 232.53■■■□□ 2.81e-9■■□□□ 11.4
MATR3P43243 ENPP1-204ENST00000513998 3107 ntTSL 523.07■■□□□ 1.281e-9■■□□□ 11.4
MATR3P43243 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.181e-12■■□□□ 11.4
MATR3P43243 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.781e-9■■□□□ 11.4
MATR3P43243 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.051e-12■■□□□ 11.4
MATR3P43243 SMURF2P1-202ENST00000579301 570 ntTSL 5 BASIC11.15□□□□□ -0.624e-10■■□□□ 11.4
MATR3P43243 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC9.65□□□□□ -0.861e-12■■□□□ 11.4
MATR3P43243 AC005562.1-202ENST00000398849 1411 ntTSL 29.28□□□□□ -0.924e-10■■□□□ 11.4
MATR3P43243 DDAH1-203ENST00000483110 3905 ntTSL 1 (best)6.58□□□□□ -1.361e-12■■□□□ 11.4
MATR3P43243 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.57□□□□□ -1.361e-12■■□□□ 11.4
MATR3P43243 SMURF2P1-201ENST00000514992 481 ntBASIC2.62□□□□□ -1.994e-10■■□□□ 11.4
MATR3P43243 CISD2-203ENST00000574446 471 ntTSL 520.97■□□□□ 0.957e-6■■□□□ 11.4
MATR3P43243 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.717e-6■■□□□ 11.4
MATR3P43243 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.487e-6■■□□□ 11.4
MATR3P43243 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.027e-6■■□□□ 11.4
MATR3P43243 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.41□□□□□ -0.17e-6■■□□□ 11.4
MATR3P43243 RBM33-208ENST00000438356 547 ntTSL 413.23□□□□□ -0.297e-6■■□□□ 11.4
MATR3P43243 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.037e-6■■□□□ 11.4
MATR3P43243 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.067e-6■■□□□ 11.4
MATR3P43243 UBAP2-212ENST00000629575 3460 ntTSL 28.3□□□□□ -1.087e-6■■□□□ 11.4
MATR3P43243 UBAP2-206ENST00000412543 1349 ntTSL 57.48□□□□□ -1.217e-6■■□□□ 11.4
MATR3P43243 UBAP2-208ENST00000459988 2628 ntTSL 26.93□□□□□ -1.37e-6■■□□□ 11.4
MATR3P43243 UBAP2-210ENST00000480885 4572 ntTSL 23.23□□□□□ -1.897e-6■■□□□ 11.4
MATR3P43243 FLCN-205ENST00000417064 757 ntTSL 222.57■■□□□ 1.21e-7■■□□□ 11.4
MATR3P43243 SNRPA1-205ENST00000558036 2108 ntTSL 222.23■■□□□ 1.151e-7■■□□□ 11.4
MATR3P43243 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.81■■□□□ 1.081e-7■■□□□ 11.4
MATR3P43243 SNRPA1-203ENST00000540017 506 ntTSL 1 (best)20■□□□□ 0.791e-7■■□□□ 11.4
MATR3P43243 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.741e-7■■□□□ 11.4
MATR3P43243 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.71e-7■■□□□ 11.4
MATR3P43243 SNRPA1-202ENST00000394082 556 ntTSL 1 (best)19.02■□□□□ 0.641e-7■■□□□ 11.4
MATR3P43243 FLCN-204ENST00000389171 2523 ntTSL 218.4■□□□□ 0.541e-7■■□□□ 11.4
MATR3P43243 SNRPA1-213ENST00000560856 588 ntTSL 416.65■□□□□ 0.261e-7■■□□□ 11.4
MATR3P43243 SNRPA1-210ENST00000560383 565 ntTSL 416.53■□□□□ 0.241e-7■■□□□ 11.4
MATR3P43243 SNRPA1-207ENST00000559309 924 ntTSL 516.07■□□□□ 0.161e-7■■□□□ 11.4
MATR3P43243 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.32■□□□□ 0.041e-7■■□□□ 11.4
MATR3P43243 SNRPA1-204ENST00000558020 466 ntTSL 314.88□□□□□ -0.031e-7■■□□□ 11.4
MATR3P43243 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.141e-7■■□□□ 11.4
MATR3P43243 SNRPA1-212ENST00000560496 824 ntTSL 511.04□□□□□ -0.641e-7■■□□□ 11.4
MATR3P43243 CAPZA1-202ENST00000466066 765 ntTSL 29.98□□□□□ -0.811e-7■■□□□ 11.4
MATR3P43243 SNRPA1-214ENST00000560987 478 ntTSL 29.94□□□□□ -0.821e-7■■□□□ 11.4
MATR3P43243 FLCN-208ENST00000473853 384 ntTSL 59.67□□□□□ -0.861e-7■■□□□ 11.4
MATR3P43243 SNRPA1-206ENST00000558059 678 ntTSL 29.58□□□□□ -0.881e-7■■□□□ 11.4
MATR3P43243 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.144e-7■■□□□ 11.4
MATR3P43243 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC14.5□□□□□ -0.094e-7■■□□□ 11.4
MATR3P43243 LGR5-206ENST00000550851 4095 ntTSL 213.34□□□□□ -0.274e-7■■□□□ 11.4
MATR3P43243 LGR5-203ENST00000540815 2800 ntTSL 1 (best) BASIC12.34□□□□□ -0.434e-7■■□□□ 11.4
MATR3P43243 ARMC8-221ENST00000491704 2777 ntTSL 5 BASIC13.3□□□□□ -0.282e-6■■□□□ 11.4
MATR3P43243 ARMC8-204ENST00000461822 2221 ntTSL 2 BASIC12.46□□□□□ -0.412e-6■■□□□ 11.4
MATR3P43243 ARMC8-223ENST00000538260 4728 ntTSL 2 BASIC12.4□□□□□ -0.422e-6■■□□□ 11.4
MATR3P43243 ARMC8-217ENST00000481646 3043 ntTSL 1 (best) BASIC11.92□□□□□ -0.52e-6■■□□□ 11.4
MATR3P43243 ARMC8-218ENST00000485396 1920 ntTSL 2 BASIC10.09□□□□□ -0.792e-6■■□□□ 11.4
MATR3P43243 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.842e-6■■□□□ 11.4
MATR3P43243 ARMC8-205ENST00000463485 1059 ntTSL 36.61□□□□□ -1.352e-6■■□□□ 11.4
MATR3P43243 SLC25A36-206ENST00000502756 796 ntTSL 226.37■■□□□ 1.812e-6■■□□□ 11.4
MATR3P43243 SLC25A36-202ENST00000393015 659 ntTSL 521.51■■□□□ 1.032e-6■■□□□ 11.4
MATR3P43243 SLC25A36-214ENST00000515813 738 ntTSL 219.98■□□□□ 0.792e-6■■□□□ 11.4
MATR3P43243 SLC25A36-205ENST00000502594 1163 ntTSL 1 (best)19.32■□□□□ 0.682e-6■■□□□ 11.4
MATR3P43243 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.452e-6■■□□□ 11.4
MATR3P43243 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.87■□□□□ 0.452e-6■■□□□ 11.4
MATR3P43243 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.282e-6■■□□□ 11.4
MATR3P43243 SLC25A36-212ENST00000513887 578 ntTSL 315.59■□□□□ 0.092e-6■■□□□ 11.4
MATR3P43243 SLC25A36-215ENST00000631654 620 ntTSL 514.92□□□□□ -0.022e-6■■□□□ 11.4
MATR3P43243 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC13.55□□□□□ -0.242e-6■■□□□ 11.4
MATR3P43243 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.064e-7■□□□□ 11.3
MATR3P43243 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.054e-7■□□□□ 11.3
MATR3P43243 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC14.15□□□□□ -0.144e-7■□□□□ 11.3
MATR3P43243 STAM-201ENST00000377500 729 ntTSL 515.59■□□□□ 0.094e-6■□□□□ 11.3
MATR3P43243 STAM-203ENST00000445846 740 ntTSL 413.24□□□□□ -0.294e-6■□□□□ 11.3
MATR3P43243 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.322e-6■□□□□ 11.3
MATR3P43243 SNX27-202ENST00000368841 7070 ntTSL 1 (best)21.68■■□□□ 1.062e-6■□□□□ 11.3
MATR3P43243 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 12e-6■□□□□ 11.3
MATR3P43243 AFF1-205ENST00000504956 1668 ntTSL 217.36■□□□□ 0.379e-9■□□□□ 11.3
MATR3P43243 AFF1-209ENST00000511996 480 ntTSL 215.3■□□□□ 0.049e-9■□□□□ 11.3
MATR3P43243 PTRH2-201ENST00000393038 901 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.338e-7■□□□□ 11.3
MATR3P43243 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.678e-7■□□□□ 11.3
MATR3P43243 PTRH2-204ENST00000579915 531 ntTSL 45.14□□□□□ -1.598e-7■□□□□ 11.3
MATR3P43243 PTRH2-205ENST00000587935 409 ntTSL 32.62□□□□□ -1.998e-7■□□□□ 11.3
MATR3P43243 AFF1-207ENST00000511442 463 ntTSL 32.09□□□□□ -2.079e-9■□□□□ 11.3
MATR3P43243 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.07■■□□□ 1.61e-7■□□□□ 11.3
MATR3P43243 SHOC2-206ENST00000489783 749 ntTSL 224.13■■□□□ 1.451e-7■□□□□ 11.3
MATR3P43243 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.381e-7■□□□□ 11.3
MATR3P43243 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.59■■□□□ 1.051e-7■□□□□ 11.3
MATR3P43243 SPAG16-206ENST00000420497 514 ntTSL 520.89■□□□□ 0.931e-7■□□□□ 11.3
MATR3P43243 SPAG16-208ENST00000440779 805 ntTSL 320.89■□□□□ 0.931e-7■□□□□ 11.3
MATR3P43243 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.6■□□□□ 0.891e-7■□□□□ 11.3
MATR3P43243 SPAG16-203ENST00000406979 2352 ntTSL 1 (best)20.17■□□□□ 0.821e-7■□□□□ 11.3
Retrieved 100 of 16,209 protein–RNA pairs in 494.3 ms