RNA–Protein interactions for RNA: ENST00000409433.2

PTRH2-202, Transcript of peptidyl-tRNA hydrolase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTRH2, Length 2,246 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTRH2-202ENST00000409433 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.97
PTRH2-202ENST00000409433 CCDC180Q9P1Z9 1646 aa18.07■□□□□ 0.48
PTRH2-202ENST00000409433 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
PTRH2-202ENST00000409433 SHROOM4Q9ULL8 1493 aa17.79■□□□□ 0.44
PTRH2-202ENST00000409433 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
PTRH2-202ENST00000409433 DCAF1Q9Y4B6 1507 aa17.4■□□□□ 0.38
PTRH2-202ENST00000409433 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
PTRH2-202ENST00000409433 MYO15BQ96JP2 1530 aa16.97■□□□□ 0.31
PTRH2-202ENST00000409433 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
PTRH2-202ENST00000409433 SCRIBQ14160 1630 aa16.83■□□□□ 0.29
PTRH2-202ENST00000409433 ABCC9O60706 1549 aa16.81■□□□□ 0.28
PTRH2-202ENST00000409433 NACADO15069 1562 aa16.76■□□□□ 0.27
PTRH2-202ENST00000409433 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
PTRH2-202ENST00000409433 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
PTRH2-202ENST00000409433 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.22
PTRH2-202ENST00000409433 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
PTRH2-202ENST00000409433 LOC105371045A0A1W2PR82 267 aa16.33■□□□□ 0.2
PTRH2-202ENST00000409433 WIZO95785 1651 aa16.28■□□□□ 0.2
PTRH2-202ENST00000409433 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
PTRH2-202ENST00000409433 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
PTRH2-202ENST00000409433 UNC13AQ9UPW8 1703 aa16.2■□□□□ 0.18
PTRH2-202ENST00000409433 PCGF6Q9BYE7 350 aa16.13■□□□□ 0.17
PTRH2-202ENST00000409433 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
PTRH2-202ENST00000409433 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
PTRH2-202ENST00000409433 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
PTRH2-202ENST00000409433 HRCP23327 699 aa16.05■□□□□ 0.16
PTRH2-202ENST00000409433 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
PTRH2-202ENST00000409433 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
PTRH2-202ENST00000409433 EIF4G1Q04637 1599 aaKnown RBP16■□□□□ 0.15
PTRH2-202ENST00000409433 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
PTRH2-202ENST00000409433 SMARCA2P51531 1590 aa15.95■□□□□ 0.14
PTRH2-202ENST00000409433 TRIM26Q12899 539 aaPredicted RBP15.93■□□□□ 0.14
PTRH2-202ENST00000409433 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
PTRH2-202ENST00000409433 PEG3Q9GZU2 1588 aa15.86■□□□□ 0.13
PTRH2-202ENST00000409433 ABCC8Q09428 1581 aa15.83■□□□□ 0.13
PTRH2-202ENST00000409433 ATAD2BQ9ULI0 1458 aa15.76■□□□□ 0.11
PTRH2-202ENST00000409433 BAZ1BQ9UIG0 1483 aaKnown RBP15.7■□□□□ 0.1
PTRH2-202ENST00000409433 SOGA1O94964 1423 aa15.68■□□□□ 0.1
PTRH2-202ENST00000409433 PPARGC1BQ86YN6 1023 aaKnown RBP15.67■□□□□ 0.1
PTRH2-202ENST00000409433 WRNQ14191 1432 aaPredicted RBP eCLIP15.64■□□□□ 0.09
PTRH2-202ENST00000409433 EEA1Q15075 1411 aa15.64■□□□□ 0.09
PTRH2-202ENST00000409433 CSRNP3Q8WYN3 585 aa15.62■□□□□ 0.09
PTRH2-202ENST00000409433 RUSC2Q8N2Y8 1516 aa15.59■□□□□ 0.09
PTRH2-202ENST00000409433 TNIKQ9UKE5 1360 aa15.56■□□□□ 0.08
PTRH2-202ENST00000409433 SYNJ1O43426 1573 aa15.54■□□□□ 0.08
PTRH2-202ENST00000409433 CEP162Q5TB80 1403 aa15.54■□□□□ 0.08
PTRH2-202ENST00000409433 ZEB1P37275 1124 aaPredicted RBP15.53■□□□□ 0.08
PTRH2-202ENST00000409433 NCAPD3P42695 1498 aa15.51■□□□□ 0.07
PTRH2-202ENST00000409433 UBTFP17480 764 aaKnown RBP15.51■□□□□ 0.07
PTRH2-202ENST00000409433 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
PTRH2-202ENST00000409433 GOLGA3Q08378 1498 aa15.48■□□□□ 0.07
PTRH2-202ENST00000409433 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
PTRH2-202ENST00000409433 KIF21BO75037 1637 aa15.4■□□□□ 0.06
PTRH2-202ENST00000409433 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
PTRH2-202ENST00000409433 BIVM-ERCC5R4GMW8 1640 aa15.35■□□□□ 0.05
PTRH2-202ENST00000409433 CFTRP13569 1480 aa15.32■□□□□ 0.04
PTRH2-202ENST00000409433 TTBK1Q5TCY1 1321 aaPredicted RBP15.32■□□□□ 0.04
PTRH2-202ENST00000409433 RAPGEF2Q9Y4G8 1499 aa15.31■□□□□ 0.04
PTRH2-202ENST00000409433 CLIP1P30622 1438 aa15.29■□□□□ 0.04
PTRH2-202ENST00000409433 CUX1P39880 1505 aa15.28■□□□□ 0.04
PTRH2-202ENST00000409433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
PTRH2-202ENST00000409433 CCER1Q8TC90 406 aaPredicted RBP15.25■□□□□ 0.03
PTRH2-202ENST00000409433 PRXQ9BXM0 1461 aa15.22■□□□□ 0.03
PTRH2-202ENST00000409433 VPS8Q8N3P4 1428 aa15.21■□□□□ 0.03
PTRH2-202ENST00000409433 ERICH3Q5RHP9 1530 aa15.2■□□□□ 0.02
PTRH2-202ENST00000409433 KIF27Q86VH2 1401 aa15.19■□□□□ 0.02
PTRH2-202ENST00000409433 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
PTRH2-202ENST00000409433 DNAJC5BQ9UF47 199 aa15.18■□□□□ 0.02
PTRH2-202ENST00000409433 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
PTRH2-202ENST00000409433 RANGAP1P46060 587 aaPredicted RBP15.17■□□□□ 0.02
PTRH2-202ENST00000409433 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
PTRH2-202ENST00000409433 APLP2Q06481 763 aa15.15■□□□□ 0.02
PTRH2-202ENST00000409433 ARAP1Q96P48 1450 aa15.06■□□□□ 0
PTRH2-202ENST00000409433 CUX2O14529 1486 aa15.05■□□□□ 0
PTRH2-202ENST00000409433 IGF1RP08069 1367 aa15.05■□□□□ -0
PTRH2-202ENST00000409433 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
PTRH2-202ENST00000409433 FGD5Q6ZNL6 1462 aa15.03■□□□□ -0
PTRH2-202ENST00000409433 FANCD2Q9BXW9 1451 aa15.02□□□□□ -0.01
PTRH2-202ENST00000409433 CARMIL1Q5VZK9 1371 aa14.97□□□□□ -0.01
PTRH2-202ENST00000409433 ARHGAP35Q9NRY4 1499 aa14.97□□□□□ -0.01
PTRH2-202ENST00000409433 KANK4Q5T7N3 995 aaPredicted RBP14.95□□□□□ -0.02
PTRH2-202ENST00000409433 DNMBPQ6XZF7 1577 aa14.93□□□□□ -0.02
PTRH2-202ENST00000409433 NESP48681 1621 aa14.93□□□□□ -0.02
PTRH2-202ENST00000409433 TOPBP1Q92547 1522 aa14.9□□□□□ -0.02
PTRH2-202ENST00000409433 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
PTRH2-202ENST00000409433 ABCA10Q8WWZ4 1543 aa14.88□□□□□ -0.03
PTRH2-202ENST00000409433 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
PTRH2-202ENST00000409433 LAMC3Q9Y6N6 1575 aa14.86□□□□□ -0.03
PTRH2-202ENST00000409433 DIEXFQ68CQ4 756 aaKnown RBP14.85□□□□□ -0.03
PTRH2-202ENST00000409433 RRBP1Q9P2E9 1410 aaKnown RBP14.84□□□□□ -0.03
PTRH2-202ENST00000409433 ZNF316A6NFI3 1004 aaPredicted RBP14.81□□□□□ -0.04
PTRH2-202ENST00000409433 URB2Q14146 1524 aaKnown RBP14.8□□□□□ -0.04
PTRH2-202ENST00000409433 MAP3K1Q13233 1512 aa14.8□□□□□ -0.04
PTRH2-202ENST00000409433 CCNB3Q8WWL7 1395 aa14.78□□□□□ -0.04
PTRH2-202ENST00000409433 PDS5BQ9NTI5 1447 aa14.78□□□□□ -0.04
PTRH2-202ENST00000409433 TIAM1Q13009 1591 aa14.77□□□□□ -0.04
PTRH2-202ENST00000409433 FHAD1B1AJZ9 1412 aa14.77□□□□□ -0.05
PTRH2-202ENST00000409433 CUL7Q14999 1698 aa14.77□□□□□ -0.05
PTRH2-202ENST00000409433 CLSPNQ9HAW4 1339 aa14.76□□□□□ -0.05
PTRH2-202ENST00000409433 P3H3Q8IVL6 736 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms