Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
BLOC1S4Q9NUP1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.3■■□□□ 1.96
BLOC1S4Q9NUP1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
BLOC1S4Q9NUP1 GPX1-201ENST00000419349 1106 ntBASIC27.29■■□□□ 1.96
BLOC1S4Q9NUP1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
BLOC1S4Q9NUP1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
BLOC1S4Q9NUP1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
BLOC1S4Q9NUP1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
BLOC1S4Q9NUP1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
BLOC1S4Q9NUP1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.29■■□□□ 1.96
BLOC1S4Q9NUP1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.28■■□□□ 1.96
BLOC1S4Q9NUP1 AC092803.2-201ENST00000564287 1899 ntBASIC27.28■■□□□ 1.96
BLOC1S4Q9NUP1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
BLOC1S4Q9NUP1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.28■■□□□ 1.96
BLOC1S4Q9NUP1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.27■■□□□ 1.96
BLOC1S4Q9NUP1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
BLOC1S4Q9NUP1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.27■■□□□ 1.96
BLOC1S4Q9NUP1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
BLOC1S4Q9NUP1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
BLOC1S4Q9NUP1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.27■■□□□ 1.96
BLOC1S4Q9NUP1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.26■■□□□ 1.95
BLOC1S4Q9NUP1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
BLOC1S4Q9NUP1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
BLOC1S4Q9NUP1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.25■■□□□ 1.95
BLOC1S4Q9NUP1 ECEL1P2-201ENST00000461596 1295 ntBASIC27.25■■□□□ 1.95
BLOC1S4Q9NUP1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
BLOC1S4Q9NUP1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
BLOC1S4Q9NUP1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.24■■□□□ 1.95
BLOC1S4Q9NUP1 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.24■■□□□ 1.95
BLOC1S4Q9NUP1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
BLOC1S4Q9NUP1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
BLOC1S4Q9NUP1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
BLOC1S4Q9NUP1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.23■■□□□ 1.95
BLOC1S4Q9NUP1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.23■■□□□ 1.95
BLOC1S4Q9NUP1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
BLOC1S4Q9NUP1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.22■■□□□ 1.95
BLOC1S4Q9NUP1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.22■■□□□ 1.95
BLOC1S4Q9NUP1 AC145676.1-201ENST00000514988 2004 ntBASIC27.21■■□□□ 1.95
BLOC1S4Q9NUP1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
BLOC1S4Q9NUP1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.21■■□□□ 1.95
BLOC1S4Q9NUP1 SMPD5-203ENST00000639008 1464 ntBASIC27.21■■□□□ 1.95
BLOC1S4Q9NUP1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.21■■□□□ 1.95
BLOC1S4Q9NUP1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.21■■□□□ 1.95
BLOC1S4Q9NUP1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.21■■□□□ 1.95
BLOC1S4Q9NUP1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.21■■□□□ 1.95
BLOC1S4Q9NUP1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
BLOC1S4Q9NUP1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
BLOC1S4Q9NUP1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
BLOC1S4Q9NUP1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
BLOC1S4Q9NUP1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.2■■□□□ 1.94
BLOC1S4Q9NUP1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.2■■□□□ 1.94
BLOC1S4Q9NUP1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
BLOC1S4Q9NUP1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
BLOC1S4Q9NUP1 ERN1-208ENST00000606895 2068 ntBASIC27.2■■□□□ 1.94
BLOC1S4Q9NUP1 DUSP8P4-201ENST00000399538 1761 ntBASIC27.2■■□□□ 1.94
BLOC1S4Q9NUP1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
BLOC1S4Q9NUP1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
BLOC1S4Q9NUP1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
BLOC1S4Q9NUP1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
BLOC1S4Q9NUP1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
BLOC1S4Q9NUP1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
BLOC1S4Q9NUP1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
BLOC1S4Q9NUP1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
BLOC1S4Q9NUP1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
BLOC1S4Q9NUP1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
BLOC1S4Q9NUP1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
BLOC1S4Q9NUP1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.17■■□□□ 1.94
BLOC1S4Q9NUP1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.17■■□□□ 1.94
BLOC1S4Q9NUP1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
BLOC1S4Q9NUP1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
BLOC1S4Q9NUP1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.16■■□□□ 1.94
BLOC1S4Q9NUP1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.16■■□□□ 1.94
BLOC1S4Q9NUP1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.16■■□□□ 1.94
BLOC1S4Q9NUP1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.16■■□□□ 1.94
BLOC1S4Q9NUP1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
BLOC1S4Q9NUP1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.15■■□□□ 1.94
BLOC1S4Q9NUP1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
BLOC1S4Q9NUP1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.15■■□□□ 1.94
BLOC1S4Q9NUP1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
BLOC1S4Q9NUP1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.14■■□□□ 1.94
BLOC1S4Q9NUP1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
BLOC1S4Q9NUP1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.13■■□□□ 1.93
BLOC1S4Q9NUP1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.13■■□□□ 1.93
BLOC1S4Q9NUP1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
BLOC1S4Q9NUP1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
BLOC1S4Q9NUP1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC27.13■■□□□ 1.93
BLOC1S4Q9NUP1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
BLOC1S4Q9NUP1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
BLOC1S4Q9NUP1 MIR3960-201ENST00000583311 91 ntBASIC27.12■■□□□ 1.93
BLOC1S4Q9NUP1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BLOC1S4Q9NUP1 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.12■■□□□ 1.93
BLOC1S4Q9NUP1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BLOC1S4Q9NUP1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
BLOC1S4Q9NUP1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
BLOC1S4Q9NUP1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
BLOC1S4Q9NUP1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
BLOC1S4Q9NUP1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
BLOC1S4Q9NUP1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.1■■□□□ 1.93
BLOC1S4Q9NUP1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
BLOC1S4Q9NUP1 HSD17B1P1-201ENST00000590052 955 ntBASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms