Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
CSNK1G1Q9HCP0 AC012354.3-201ENST00000623734 483 ntBASIC25.72■■□□□ 1.71
CSNK1G1Q9HCP0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CSNK1G1Q9HCP0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CSNK1G1Q9HCP0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CSNK1G1Q9HCP0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.71■■□□□ 1.71
CSNK1G1Q9HCP0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CSNK1G1Q9HCP0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
CSNK1G1Q9HCP0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.71■■□□□ 1.71
CSNK1G1Q9HCP0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
CSNK1G1Q9HCP0 AC129492.7-201ENST00000622992 756 ntBASIC25.7■■□□□ 1.7
CSNK1G1Q9HCP0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CSNK1G1Q9HCP0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSNK1G1Q9HCP0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
CSNK1G1Q9HCP0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CSNK1G1Q9HCP0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CSNK1G1Q9HCP0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
CSNK1G1Q9HCP0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CSNK1G1Q9HCP0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CSNK1G1Q9HCP0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CSNK1G1Q9HCP0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CSNK1G1Q9HCP0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
CSNK1G1Q9HCP0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
CSNK1G1Q9HCP0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CSNK1G1Q9HCP0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSNK1G1Q9HCP0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSNK1G1Q9HCP0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.67■■□□□ 1.7
CSNK1G1Q9HCP0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSNK1G1Q9HCP0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CSNK1G1Q9HCP0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CSNK1G1Q9HCP0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.66■■□□□ 1.7
CSNK1G1Q9HCP0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CSNK1G1Q9HCP0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CSNK1G1Q9HCP0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CSNK1G1Q9HCP0 AL121749.1-202ENST00000609313 2153 ntBASIC25.66■■□□□ 1.7
CSNK1G1Q9HCP0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CSNK1G1Q9HCP0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
CSNK1G1Q9HCP0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CSNK1G1Q9HCP0 AC004987.1-201ENST00000428627 508 ntBASIC25.65■■□□□ 1.7
CSNK1G1Q9HCP0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CSNK1G1Q9HCP0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
CSNK1G1Q9HCP0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.65■■□□□ 1.7
CSNK1G1Q9HCP0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CSNK1G1Q9HCP0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CSNK1G1Q9HCP0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CSNK1G1Q9HCP0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CSNK1G1Q9HCP0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CSNK1G1Q9HCP0 SPCS2P3-201ENST00000500401 656 ntBASIC25.64■■□□□ 1.7
CSNK1G1Q9HCP0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CSNK1G1Q9HCP0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
CSNK1G1Q9HCP0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CSNK1G1Q9HCP0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CSNK1G1Q9HCP0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CSNK1G1Q9HCP0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CSNK1G1Q9HCP0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CSNK1G1Q9HCP0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CSNK1G1Q9HCP0 ATP5G2P3-201ENST00000429083 425 ntBASIC25.63■■□□□ 1.69
CSNK1G1Q9HCP0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.63■■□□□ 1.69
CSNK1G1Q9HCP0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CSNK1G1Q9HCP0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CSNK1G1Q9HCP0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CSNK1G1Q9HCP0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.62■■□□□ 1.69
CSNK1G1Q9HCP0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CSNK1G1Q9HCP0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CSNK1G1Q9HCP0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.61■■□□□ 1.69
CSNK1G1Q9HCP0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSNK1G1Q9HCP0 TSPY13P-201ENST00000338964 914 ntBASIC25.61■■□□□ 1.69
CSNK1G1Q9HCP0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CSNK1G1Q9HCP0 DUX4L9-201ENST00000449051 1259 ntBASIC25.61■■□□□ 1.69
CSNK1G1Q9HCP0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSNK1G1Q9HCP0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSNK1G1Q9HCP0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CSNK1G1Q9HCP0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSNK1G1Q9HCP0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CSNK1G1Q9HCP0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CSNK1G1Q9HCP0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CSNK1G1Q9HCP0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CSNK1G1Q9HCP0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CSNK1G1Q9HCP0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSNK1G1Q9HCP0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CSNK1G1Q9HCP0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.59■■□□□ 1.69
CSNK1G1Q9HCP0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CSNK1G1Q9HCP0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.59■■□□□ 1.69
CSNK1G1Q9HCP0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CSNK1G1Q9HCP0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CSNK1G1Q9HCP0 AL033527.3-201ENST00000566366 1196 ntBASIC25.58■■□□□ 1.69
CSNK1G1Q9HCP0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CSNK1G1Q9HCP0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CSNK1G1Q9HCP0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.57■■□□□ 1.68
CSNK1G1Q9HCP0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CSNK1G1Q9HCP0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CSNK1G1Q9HCP0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSNK1G1Q9HCP0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.56■■□□□ 1.68
CSNK1G1Q9HCP0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.56■■□□□ 1.68
CSNK1G1Q9HCP0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CSNK1G1Q9HCP0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSNK1G1Q9HCP0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSNK1G1Q9HCP0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.56■■□□□ 1.68
CSNK1G1Q9HCP0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.56■■□□□ 1.68
CSNK1G1Q9HCP0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms