Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.94■□□□□ 0.94
SPG11Q96JI7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPG11Q96JI7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPG11Q96JI7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPG11Q96JI7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.94■□□□□ 0.94
SPG11Q96JI7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPG11Q96JI7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.93■□□□□ 0.94
SPG11Q96JI7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
SPG11Q96JI7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.93■□□□□ 0.94
SPG11Q96JI7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.93■□□□□ 0.94
SPG11Q96JI7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.93■□□□□ 0.94
SPG11Q96JI7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.93■□□□□ 0.94
SPG11Q96JI7 AC022616.5-201ENST00000518796 181 ntBASIC20.93■□□□□ 0.94
SPG11Q96JI7 AC131281.2-201ENST00000520478 145 ntBASIC20.93■□□□□ 0.94
SPG11Q96JI7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPG11Q96JI7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.92■□□□□ 0.94
SPG11Q96JI7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPG11Q96JI7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPG11Q96JI7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.92■□□□□ 0.94
SPG11Q96JI7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPG11Q96JI7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
SPG11Q96JI7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SPG11Q96JI7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPG11Q96JI7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.91■□□□□ 0.94
SPG11Q96JI7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPG11Q96JI7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPG11Q96JI7 BX664725.1-201ENST00000438252 379 ntBASIC20.9■□□□□ 0.94
SPG11Q96JI7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPG11Q96JI7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPG11Q96JI7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPG11Q96JI7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SPG11Q96JI7 RPS2P7-201ENST00000447334 885 ntBASIC20.9■□□□□ 0.94
SPG11Q96JI7 UNC93B8-201ENST00000511903 705 ntBASIC20.9■□□□□ 0.94
SPG11Q96JI7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.9■□□□□ 0.94
SPG11Q96JI7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPG11Q96JI7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.89■□□□□ 0.94
SPG11Q96JI7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPG11Q96JI7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.89■□□□□ 0.93
SPG11Q96JI7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.89■□□□□ 0.93
SPG11Q96JI7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPG11Q96JI7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPG11Q96JI7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPG11Q96JI7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPG11Q96JI7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPG11Q96JI7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.87■□□□□ 0.93
SPG11Q96JI7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPG11Q96JI7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.87■□□□□ 0.93
SPG11Q96JI7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.87■□□□□ 0.93
SPG11Q96JI7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.87■□□□□ 0.93
SPG11Q96JI7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.87■□□□□ 0.93
SPG11Q96JI7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.87■□□□□ 0.93
SPG11Q96JI7 AC110285.6-201ENST00000617652 491 ntBASIC20.86■□□□□ 0.93
SPG11Q96JI7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPG11Q96JI7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPG11Q96JI7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
SPG11Q96JI7 AL359504.2-201ENST00000605506 1601 ntBASIC20.85■□□□□ 0.93
SPG11Q96JI7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPG11Q96JI7 LONRF2P2-201ENST00000439212 571 ntBASIC20.85■□□□□ 0.93
SPG11Q96JI7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPG11Q96JI7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SPG11Q96JI7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SPG11Q96JI7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPG11Q96JI7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.84■□□□□ 0.93
SPG11Q96JI7 WHAMMP3-201ENST00000611636 1609 ntBASIC20.84■□□□□ 0.93
SPG11Q96JI7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPG11Q96JI7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPG11Q96JI7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.84■□□□□ 0.93
SPG11Q96JI7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPG11Q96JI7 KRT16P3-201ENST00000439127 1283 ntBASIC20.83■□□□□ 0.93
SPG11Q96JI7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPG11Q96JI7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPG11Q96JI7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SPG11Q96JI7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SPG11Q96JI7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPG11Q96JI7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPG11Q96JI7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.83■□□□□ 0.92
SPG11Q96JI7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SPG11Q96JI7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SPG11Q96JI7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPG11Q96JI7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.83■□□□□ 0.92
SPG11Q96JI7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SPG11Q96JI7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPG11Q96JI7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPG11Q96JI7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPG11Q96JI7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.82■□□□□ 0.92
SPG11Q96JI7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SPG11Q96JI7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPG11Q96JI7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.82■□□□□ 0.92
SPG11Q96JI7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.82■□□□□ 0.92
SPG11Q96JI7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.82■□□□□ 0.92
SPG11Q96JI7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.82■□□□□ 0.92
SPG11Q96JI7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPG11Q96JI7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPG11Q96JI7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.81■□□□□ 0.92
SPG11Q96JI7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPG11Q96JI7 AP002414.2-202ENST00000590929 1450 ntBASIC20.81■□□□□ 0.92
SPG11Q96JI7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.8■□□□□ 0.92
SPG11Q96JI7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.8■□□□□ 0.92
SPG11Q96JI7 AL139246.5-201ENST00000606645 996 ntBASIC20.8■□□□□ 0.92
SPG11Q96JI7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms