Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHKBP1Q8TBC3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.67■■□□□ 1.7
SHKBP1Q8TBC3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.67■■□□□ 1.7
SHKBP1Q8TBC3 AC074183.2-201ENST00000623112 922 ntBASIC25.67■■□□□ 1.7
SHKBP1Q8TBC3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
SHKBP1Q8TBC3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.67■■□□□ 1.7
SHKBP1Q8TBC3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.66■■□□□ 1.7
SHKBP1Q8TBC3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SHKBP1Q8TBC3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHKBP1Q8TBC3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHKBP1Q8TBC3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHKBP1Q8TBC3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.66■■□□□ 1.7
SHKBP1Q8TBC3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.66■■□□□ 1.7
SHKBP1Q8TBC3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SHKBP1Q8TBC3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHKBP1Q8TBC3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.66■■□□□ 1.7
SHKBP1Q8TBC3 KRT8P33-201ENST00000508125 1423 ntBASIC25.65■■□□□ 1.7
SHKBP1Q8TBC3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.65■■□□□ 1.7
SHKBP1Q8TBC3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHKBP1Q8TBC3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.65■■□□□ 1.7
SHKBP1Q8TBC3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHKBP1Q8TBC3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SHKBP1Q8TBC3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.64■■□□□ 1.7
SHKBP1Q8TBC3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.64■■□□□ 1.7
SHKBP1Q8TBC3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
SHKBP1Q8TBC3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SHKBP1Q8TBC3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
SHKBP1Q8TBC3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SHKBP1Q8TBC3 DRD5P2-201ENST00000421395 2012 ntBASIC25.63■■□□□ 1.69
SHKBP1Q8TBC3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.63■■□□□ 1.69
SHKBP1Q8TBC3 PVT1_1.1-201ENST00000615125 194 ntBASIC25.63■■□□□ 1.69
SHKBP1Q8TBC3 AL035685.1-201ENST00000636663 812 ntBASIC25.63■■□□□ 1.69
SHKBP1Q8TBC3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.63■■□□□ 1.69
SHKBP1Q8TBC3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SHKBP1Q8TBC3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.62■■□□□ 1.69
SHKBP1Q8TBC3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SHKBP1Q8TBC3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SHKBP1Q8TBC3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SHKBP1Q8TBC3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SHKBP1Q8TBC3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.62■■□□□ 1.69
SHKBP1Q8TBC3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.62■■□□□ 1.69
SHKBP1Q8TBC3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
SHKBP1Q8TBC3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SHKBP1Q8TBC3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SHKBP1Q8TBC3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
SHKBP1Q8TBC3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHKBP1Q8TBC3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.61■■□□□ 1.69
SHKBP1Q8TBC3 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.61■■□□□ 1.69
SHKBP1Q8TBC3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SHKBP1Q8TBC3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SHKBP1Q8TBC3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHKBP1Q8TBC3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHKBP1Q8TBC3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.6■■□□□ 1.69
SHKBP1Q8TBC3 AC103834.1-201ENST00000520383 144 ntBASIC25.6■■□□□ 1.69
SHKBP1Q8TBC3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHKBP1Q8TBC3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
SHKBP1Q8TBC3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SHKBP1Q8TBC3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHKBP1Q8TBC3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
SHKBP1Q8TBC3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SHKBP1Q8TBC3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHKBP1Q8TBC3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SHKBP1Q8TBC3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.58■■□□□ 1.69
SHKBP1Q8TBC3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHKBP1Q8TBC3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.58■■□□□ 1.69
SHKBP1Q8TBC3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
SHKBP1Q8TBC3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.58■■□□□ 1.68
SHKBP1Q8TBC3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.57■■□□□ 1.68
SHKBP1Q8TBC3 AC142086.6-201ENST00000621154 1765 ntBASIC25.57■■□□□ 1.68
SHKBP1Q8TBC3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHKBP1Q8TBC3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHKBP1Q8TBC3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.57■■□□□ 1.68
SHKBP1Q8TBC3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHKBP1Q8TBC3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHKBP1Q8TBC3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.56■■□□□ 1.68
SHKBP1Q8TBC3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
SHKBP1Q8TBC3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SHKBP1Q8TBC3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHKBP1Q8TBC3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHKBP1Q8TBC3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.54■■□□□ 1.68
SHKBP1Q8TBC3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SHKBP1Q8TBC3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHKBP1Q8TBC3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.54■■□□□ 1.68
SHKBP1Q8TBC3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.53■■□□□ 1.68
SHKBP1Q8TBC3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.53■■□□□ 1.68
SHKBP1Q8TBC3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHKBP1Q8TBC3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHKBP1Q8TBC3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
SHKBP1Q8TBC3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHKBP1Q8TBC3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHKBP1Q8TBC3 YBX1P4-201ENST00000392794 808 ntBASIC25.52■■□□□ 1.68
SHKBP1Q8TBC3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
SHKBP1Q8TBC3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.52■■□□□ 1.68
SHKBP1Q8TBC3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.52■■□□□ 1.68
SHKBP1Q8TBC3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
SHKBP1Q8TBC3 AL449106.1-201ENST00000608517 1980 ntBASIC25.51■■□□□ 1.67
SHKBP1Q8TBC3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.51■■□□□ 1.67
SHKBP1Q8TBC3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SHKBP1Q8TBC3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
SHKBP1Q8TBC3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms