Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC168Q8NDH2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC168Q8NDH2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.79■□□□□ 0.92
CCDC168Q8NDH2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC168Q8NDH2 MIR3621-201ENST00000580529 85 ntBASIC20.79■□□□□ 0.92
CCDC168Q8NDH2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC168Q8NDH2 AL136116.3-201ENST00000402907 1138 ntBASIC20.79■□□□□ 0.92
CCDC168Q8NDH2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC168Q8NDH2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC168Q8NDH2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC168Q8NDH2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC168Q8NDH2 AC133561.4-201ENST00000566112 224 ntBASIC20.78■□□□□ 0.92
CCDC168Q8NDH2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC168Q8NDH2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC168Q8NDH2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC168Q8NDH2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.77■□□□□ 0.92
CCDC168Q8NDH2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC168Q8NDH2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CCDC168Q8NDH2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC168Q8NDH2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC168Q8NDH2 AC096631.2-201ENST00000436136 790 ntBASIC20.77■□□□□ 0.92
CCDC168Q8NDH2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CCDC168Q8NDH2 RPS2P7-201ENST00000447334 885 ntBASIC20.77■□□□□ 0.91
CCDC168Q8NDH2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC168Q8NDH2 MIR4466-201ENST00000606121 54 ntBASIC20.76■□□□□ 0.91
CCDC168Q8NDH2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC168Q8NDH2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC168Q8NDH2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCDC168Q8NDH2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC168Q8NDH2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC168Q8NDH2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC168Q8NDH2 MIR5787-201ENST00000611784 55 ntBASIC20.75■□□□□ 0.91
CCDC168Q8NDH2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC168Q8NDH2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC168Q8NDH2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC168Q8NDH2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC168Q8NDH2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC168Q8NDH2 AC100797.4-201ENST00000631653 1827 ntBASIC20.74■□□□□ 0.91
CCDC168Q8NDH2 TSPY9P-201ENST00000440215 945 ntBASIC20.74■□□□□ 0.91
CCDC168Q8NDH2 TSPY11P-201ENST00000442607 1045 ntBASIC20.74■□□□□ 0.91
CCDC168Q8NDH2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC168Q8NDH2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC168Q8NDH2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC168Q8NDH2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC168Q8NDH2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC168Q8NDH2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC168Q8NDH2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC168Q8NDH2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
CCDC168Q8NDH2 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.72■□□□□ 0.91
CCDC168Q8NDH2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC168Q8NDH2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC168Q8NDH2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC168Q8NDH2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC168Q8NDH2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC168Q8NDH2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC168Q8NDH2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC168Q8NDH2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC168Q8NDH2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.7■□□□□ 0.91
CCDC168Q8NDH2 AC092028.1-203ENST00000608262 953 ntBASIC20.7■□□□□ 0.9
CCDC168Q8NDH2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC168Q8NDH2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC168Q8NDH2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.7■□□□□ 0.9
CCDC168Q8NDH2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC168Q8NDH2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC168Q8NDH2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC168Q8NDH2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC168Q8NDH2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC168Q8NDH2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC168Q8NDH2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC168Q8NDH2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC168Q8NDH2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC168Q8NDH2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC168Q8NDH2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC168Q8NDH2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC168Q8NDH2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC168Q8NDH2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC168Q8NDH2 SUDS3P1-201ENST00000505831 966 ntBASIC20.68■□□□□ 0.9
CCDC168Q8NDH2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC168Q8NDH2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC168Q8NDH2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.68■□□□□ 0.9
CCDC168Q8NDH2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC168Q8NDH2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC168Q8NDH2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC168Q8NDH2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CCDC168Q8NDH2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms