Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC71LQ8N9Z2 DUX4L28-201ENST00000623687 678 ntBASIC20.12■□□□□ 0.81
CCDC71LQ8N9Z2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC71LQ8N9Z2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC71LQ8N9Z2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC71LQ8N9Z2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC71LQ8N9Z2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
CCDC71LQ8N9Z2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC71LQ8N9Z2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC71LQ8N9Z2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC71LQ8N9Z2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC71LQ8N9Z2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC71LQ8N9Z2 MIR3665-201ENST00000578708 105 ntBASIC20.1■□□□□ 0.81
CCDC71LQ8N9Z2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC71LQ8N9Z2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC71LQ8N9Z2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC71LQ8N9Z2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC71LQ8N9Z2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC71LQ8N9Z2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCDC71LQ8N9Z2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC71LQ8N9Z2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC71LQ8N9Z2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC71LQ8N9Z2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC71LQ8N9Z2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC71LQ8N9Z2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC71LQ8N9Z2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC71LQ8N9Z2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC71LQ8N9Z2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC71LQ8N9Z2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC71LQ8N9Z2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC71LQ8N9Z2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC71LQ8N9Z2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC71LQ8N9Z2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC71LQ8N9Z2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC71LQ8N9Z2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC71LQ8N9Z2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC71LQ8N9Z2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC71LQ8N9Z2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC71LQ8N9Z2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC71LQ8N9Z2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC71LQ8N9Z2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC71LQ8N9Z2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC71LQ8N9Z2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC71LQ8N9Z2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC71LQ8N9Z2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC71LQ8N9Z2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC71LQ8N9Z2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC71LQ8N9Z2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC71LQ8N9Z2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC71LQ8N9Z2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC71LQ8N9Z2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC71LQ8N9Z2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC71LQ8N9Z2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71LQ8N9Z2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71LQ8N9Z2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71LQ8N9Z2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71LQ8N9Z2 AC022211.4-201ENST00000625094 2161 ntBASIC20.05■□□□□ 0.8
CCDC71LQ8N9Z2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71LQ8N9Z2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71LQ8N9Z2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC71LQ8N9Z2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC71LQ8N9Z2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC71LQ8N9Z2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC71LQ8N9Z2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC71LQ8N9Z2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC71LQ8N9Z2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC71LQ8N9Z2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC71LQ8N9Z2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC71LQ8N9Z2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC71LQ8N9Z2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC71LQ8N9Z2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC71LQ8N9Z2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC71LQ8N9Z2 AL139125.2-201ENST00000623134 1869 ntBASIC20.02■□□□□ 0.8
CCDC71LQ8N9Z2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC71LQ8N9Z2 AC138932.3-201ENST00000567634 1902 ntBASIC20.02■□□□□ 0.79
CCDC71LQ8N9Z2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC71LQ8N9Z2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC71LQ8N9Z2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC71LQ8N9Z2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC71LQ8N9Z2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC71LQ8N9Z2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC71LQ8N9Z2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC71LQ8N9Z2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC71LQ8N9Z2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC71LQ8N9Z2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC71LQ8N9Z2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC71LQ8N9Z2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20■□□□□ 0.79
CCDC71LQ8N9Z2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC71LQ8N9Z2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC71LQ8N9Z2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC71LQ8N9Z2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC71LQ8N9Z2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC71LQ8N9Z2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC71LQ8N9Z2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC71LQ8N9Z2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC71LQ8N9Z2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC71LQ8N9Z2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC71LQ8N9Z2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC71LQ8N9Z2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC71LQ8N9Z2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms