Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPSF7Q8N684 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CPSF7Q8N684 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CPSF7Q8N684 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.74■■□□□ 1.39
CPSF7Q8N684 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF7Q8N684 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF7Q8N684 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF7Q8N684 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CPSF7Q8N684 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.73■■□□□ 1.39
CPSF7Q8N684 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF7Q8N684 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF7Q8N684 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.73■■□□□ 1.39
CPSF7Q8N684 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.72■■□□□ 1.39
CPSF7Q8N684 WHAMMP3-201ENST00000611636 1609 ntBASIC23.72■■□□□ 1.39
CPSF7Q8N684 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CPSF7Q8N684 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CPSF7Q8N684 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CPSF7Q8N684 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CPSF7Q8N684 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPSF7Q8N684 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CPSF7Q8N684 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPSF7Q8N684 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPSF7Q8N684 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.69■■□□□ 1.38
CPSF7Q8N684 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.69■■□□□ 1.38
CPSF7Q8N684 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPSF7Q8N684 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CPSF7Q8N684 AC010501.1-201ENST00000606270 1962 ntBASIC23.69■■□□□ 1.38
CPSF7Q8N684 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPSF7Q8N684 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPSF7Q8N684 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.69■■□□□ 1.38
CPSF7Q8N684 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.69■■□□□ 1.38
CPSF7Q8N684 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.69■■□□□ 1.38
CPSF7Q8N684 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPSF7Q8N684 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CPSF7Q8N684 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CPSF7Q8N684 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CPSF7Q8N684 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CPSF7Q8N684 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
CPSF7Q8N684 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPSF7Q8N684 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.67■■□□□ 1.38
CPSF7Q8N684 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.67■■□□□ 1.38
CPSF7Q8N684 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPSF7Q8N684 AC142381.3-201ENST00000568208 1670 ntBASIC23.66■■□□□ 1.38
CPSF7Q8N684 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPSF7Q8N684 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CPSF7Q8N684 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPSF7Q8N684 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.65■■□□□ 1.38
CPSF7Q8N684 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CPSF7Q8N684 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CPSF7Q8N684 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CPSF7Q8N684 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CPSF7Q8N684 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CPSF7Q8N684 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CPSF7Q8N684 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.64■■□□□ 1.37
CPSF7Q8N684 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CPSF7Q8N684 AC110285.7-201ENST00000624417 1536 ntBASIC23.64■■□□□ 1.37
CPSF7Q8N684 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPSF7Q8N684 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPSF7Q8N684 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CPSF7Q8N684 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.63■■□□□ 1.37
CPSF7Q8N684 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.63■■□□□ 1.37
CPSF7Q8N684 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPSF7Q8N684 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPSF7Q8N684 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
CPSF7Q8N684 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CPSF7Q8N684 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CPSF7Q8N684 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CPSF7Q8N684 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CPSF7Q8N684 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.61■■□□□ 1.37
CPSF7Q8N684 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.61■■□□□ 1.37
CPSF7Q8N684 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CPSF7Q8N684 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CPSF7Q8N684 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.6■■□□□ 1.37
CPSF7Q8N684 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.6■■□□□ 1.37
CPSF7Q8N684 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPSF7Q8N684 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.6■■□□□ 1.37
CPSF7Q8N684 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CPSF7Q8N684 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.6■■□□□ 1.37
CPSF7Q8N684 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.59■■□□□ 1.37
CPSF7Q8N684 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
CPSF7Q8N684 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPSF7Q8N684 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPSF7Q8N684 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPSF7Q8N684 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CPSF7Q8N684 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPSF7Q8N684 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CPSF7Q8N684 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPSF7Q8N684 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPSF7Q8N684 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CPSF7Q8N684 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPSF7Q8N684 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CPSF7Q8N684 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPSF7Q8N684 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPSF7Q8N684 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPSF7Q8N684 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPSF7Q8N684 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CPSF7Q8N684 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPSF7Q8N684 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPSF7Q8N684 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPSF7Q8N684 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms