Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SMC5Q8IY18 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SMC5Q8IY18 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
SMC5Q8IY18 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC30.36■■■□□ 2.45
SMC5Q8IY18 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
SMC5Q8IY18 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SMC5Q8IY18 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SMC5Q8IY18 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
SMC5Q8IY18 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SMC5Q8IY18 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SMC5Q8IY18 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SMC5Q8IY18 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
SMC5Q8IY18 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SMC5Q8IY18 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SMC5Q8IY18 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SMC5Q8IY18 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.34■■■□□ 2.45
SMC5Q8IY18 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC30.33■■■□□ 2.45
SMC5Q8IY18 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SMC5Q8IY18 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SMC5Q8IY18 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
SMC5Q8IY18 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
SMC5Q8IY18 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
SMC5Q8IY18 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMC5Q8IY18 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMC5Q8IY18 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMC5Q8IY18 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMC5Q8IY18 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
SMC5Q8IY18 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMC5Q8IY18 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SMC5Q8IY18 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMC5Q8IY18 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMC5Q8IY18 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMC5Q8IY18 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.3■■■□□ 2.44
SMC5Q8IY18 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SMC5Q8IY18 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SMC5Q8IY18 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SMC5Q8IY18 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
SMC5Q8IY18 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC30.27■■■□□ 2.44
SMC5Q8IY18 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SMC5Q8IY18 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.27■■■□□ 2.44
SMC5Q8IY18 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.27■■■□□ 2.44
SMC5Q8IY18 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
SMC5Q8IY18 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.26■■■□□ 2.43
SMC5Q8IY18 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SMC5Q8IY18 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SMC5Q8IY18 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.25■■■□□ 2.43
SMC5Q8IY18 MIR7108-201ENST00000614319 87 ntBASIC30.25■■■□□ 2.43
SMC5Q8IY18 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SMC5Q8IY18 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
SMC5Q8IY18 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SMC5Q8IY18 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.24■■■□□ 2.43
SMC5Q8IY18 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMC5Q8IY18 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.24■■■□□ 2.43
SMC5Q8IY18 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.24■■■□□ 2.43
SMC5Q8IY18 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMC5Q8IY18 AC096887.2-201ENST00000623443 1957 ntBASIC30.24■■■□□ 2.43
SMC5Q8IY18 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
SMC5Q8IY18 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SMC5Q8IY18 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SMC5Q8IY18 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.22■■■□□ 2.43
SMC5Q8IY18 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMC5Q8IY18 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
SMC5Q8IY18 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
SMC5Q8IY18 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SMC5Q8IY18 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SMC5Q8IY18 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SMC5Q8IY18 AC126177.7-201ENST00000547904 679 ntBASIC30.21■■■□□ 2.43
SMC5Q8IY18 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.2■■■□□ 2.42
SMC5Q8IY18 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
SMC5Q8IY18 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
SMC5Q8IY18 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
SMC5Q8IY18 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SMC5Q8IY18 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMC5Q8IY18 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMC5Q8IY18 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
SMC5Q8IY18 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMC5Q8IY18 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SMC5Q8IY18 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.18■■■□□ 2.42
SMC5Q8IY18 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMC5Q8IY18 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMC5Q8IY18 AL157400.5-201ENST00000507624 621 ntBASIC30.17■■■□□ 2.42
SMC5Q8IY18 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SMC5Q8IY18 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.17■■■□□ 2.42
SMC5Q8IY18 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SMC5Q8IY18 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
SMC5Q8IY18 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SMC5Q8IY18 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.16■■■□□ 2.42
SMC5Q8IY18 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
SMC5Q8IY18 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC30.14■■■□□ 2.42
SMC5Q8IY18 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.14■■■□□ 2.42
SMC5Q8IY18 MIR639-201ENST00000384974 98 ntBASIC30.14■■■□□ 2.42
SMC5Q8IY18 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SMC5Q8IY18 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.14■■■□□ 2.42
SMC5Q8IY18 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SMC5Q8IY18 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.14■■■□□ 2.41
SMC5Q8IY18 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SMC5Q8IY18 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SMC5Q8IY18 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
SMC5Q8IY18 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SMC5Q8IY18 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.12■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms