Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
MRPL55Q7Z7F7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MRPL55Q7Z7F7 DUSP8P4-201ENST00000399538 1761 ntBASIC15.53■□□□□ 0.08
MRPL55Q7Z7F7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MRPL55Q7Z7F7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
MRPL55Q7Z7F7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MRPL55Q7Z7F7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC15.52■□□□□ 0.08
MRPL55Q7Z7F7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MRPL55Q7Z7F7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
MRPL55Q7Z7F7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MRPL55Q7Z7F7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRPL55Q7Z7F7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL55Q7Z7F7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL55Q7Z7F7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL55Q7Z7F7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC15.5■□□□□ 0.07
MRPL55Q7Z7F7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL55Q7Z7F7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL55Q7Z7F7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL55Q7Z7F7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL55Q7Z7F7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL55Q7Z7F7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL55Q7Z7F7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL55Q7Z7F7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC15.49■□□□□ 0.07
MRPL55Q7Z7F7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL55Q7Z7F7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL55Q7Z7F7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
MRPL55Q7Z7F7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL55Q7Z7F7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL55Q7Z7F7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL55Q7Z7F7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL55Q7Z7F7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL55Q7Z7F7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL55Q7Z7F7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL55Q7Z7F7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC15.48■□□□□ 0.07
MRPL55Q7Z7F7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC15.48■□□□□ 0.07
MRPL55Q7Z7F7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.47■□□□□ 0.07
MRPL55Q7Z7F7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MRPL55Q7Z7F7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MRPL55Q7Z7F7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MRPL55Q7Z7F7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MRPL55Q7Z7F7 AL359258.2-201ENST00000564063 1566 ntBASIC15.46■□□□□ 0.07
MRPL55Q7Z7F7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MRPL55Q7Z7F7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MRPL55Q7Z7F7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MRPL55Q7Z7F7 ABHD17AP4-201ENST00000411545 909 ntBASIC15.46■□□□□ 0.07
MRPL55Q7Z7F7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MRPL55Q7Z7F7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC15.45■□□□□ 0.06
MRPL55Q7Z7F7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
MRPL55Q7Z7F7 HLA-V-202ENST00000446817 847 ntBASIC15.45■□□□□ 0.06
MRPL55Q7Z7F7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC15.45■□□□□ 0.06
MRPL55Q7Z7F7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC15.45■□□□□ 0.06
MRPL55Q7Z7F7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC15.45■□□□□ 0.06
MRPL55Q7Z7F7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MRPL55Q7Z7F7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRPL55Q7Z7F7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MRPL55Q7Z7F7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
MRPL55Q7Z7F7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRPL55Q7Z7F7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC15.44■□□□□ 0.06
MRPL55Q7Z7F7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
MRPL55Q7Z7F7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC15.44■□□□□ 0.06
MRPL55Q7Z7F7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MRPL55Q7Z7F7 AC126177.7-201ENST00000547904 679 ntBASIC15.44■□□□□ 0.06
MRPL55Q7Z7F7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms