Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TTC39BQ5VTQ0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
TTC39BQ5VTQ0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TTC39BQ5VTQ0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TTC39BQ5VTQ0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.33■■□□□ 1.65
TTC39BQ5VTQ0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TTC39BQ5VTQ0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.33■■□□□ 1.64
TTC39BQ5VTQ0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TTC39BQ5VTQ0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TTC39BQ5VTQ0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
TTC39BQ5VTQ0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.32■■□□□ 1.64
TTC39BQ5VTQ0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TTC39BQ5VTQ0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TTC39BQ5VTQ0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TTC39BQ5VTQ0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TTC39BQ5VTQ0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.3■■□□□ 1.64
TTC39BQ5VTQ0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
TTC39BQ5VTQ0 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.3■■□□□ 1.64
TTC39BQ5VTQ0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
TTC39BQ5VTQ0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.3■■□□□ 1.64
TTC39BQ5VTQ0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 RP9P-202ENST00000450133 1212 ntBASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 NTF6A-201ENST00000591175 560 ntBASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TTC39BQ5VTQ0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TTC39BQ5VTQ0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TTC39BQ5VTQ0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.28■■□□□ 1.64
TTC39BQ5VTQ0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TTC39BQ5VTQ0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.27■■□□□ 1.64
TTC39BQ5VTQ0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.27■■□□□ 1.64
TTC39BQ5VTQ0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TTC39BQ5VTQ0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TTC39BQ5VTQ0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TTC39BQ5VTQ0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
TTC39BQ5VTQ0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TTC39BQ5VTQ0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
TTC39BQ5VTQ0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.26■■□□□ 1.63
TTC39BQ5VTQ0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TTC39BQ5VTQ0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
TTC39BQ5VTQ0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
TTC39BQ5VTQ0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TTC39BQ5VTQ0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TTC39BQ5VTQ0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TTC39BQ5VTQ0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TTC39BQ5VTQ0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TTC39BQ5VTQ0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TTC39BQ5VTQ0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TTC39BQ5VTQ0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TTC39BQ5VTQ0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
TTC39BQ5VTQ0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.23■■□□□ 1.63
TTC39BQ5VTQ0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.23■■□□□ 1.63
TTC39BQ5VTQ0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.23■■□□□ 1.63
TTC39BQ5VTQ0 AC142472.1-201ENST00000612013 1741 ntBASIC25.23■■□□□ 1.63
TTC39BQ5VTQ0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
TTC39BQ5VTQ0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TTC39BQ5VTQ0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TTC39BQ5VTQ0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
TTC39BQ5VTQ0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TTC39BQ5VTQ0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TTC39BQ5VTQ0 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.22■■□□□ 1.63
TTC39BQ5VTQ0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
TTC39BQ5VTQ0 AC093536.1-201ENST00000569153 554 ntBASIC25.22■■□□□ 1.63
TTC39BQ5VTQ0 U85056.1-201ENST00000616429 682 ntBASIC25.22■■□□□ 1.63
TTC39BQ5VTQ0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TTC39BQ5VTQ0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.21■■□□□ 1.63
TTC39BQ5VTQ0 AC091060.1-201ENST00000623524 1766 ntBASIC25.21■■□□□ 1.63
TTC39BQ5VTQ0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TTC39BQ5VTQ0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TTC39BQ5VTQ0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
TTC39BQ5VTQ0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.2■■□□□ 1.63
TTC39BQ5VTQ0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.2■■□□□ 1.62
TTC39BQ5VTQ0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TTC39BQ5VTQ0 AC026202.3-201ENST00000600805 1127 ntBASIC25.2■■□□□ 1.62
TTC39BQ5VTQ0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TTC39BQ5VTQ0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
TTC39BQ5VTQ0 AC009831.1-201ENST00000580420 1582 ntBASIC25.19■■□□□ 1.62
TTC39BQ5VTQ0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TTC39BQ5VTQ0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
TTC39BQ5VTQ0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
TTC39BQ5VTQ0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.18■■□□□ 1.62
TTC39BQ5VTQ0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
TTC39BQ5VTQ0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
TTC39BQ5VTQ0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TTC39BQ5VTQ0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.18■■□□□ 1.62
TTC39BQ5VTQ0 AC133552.2-201ENST00000619106 1032 ntBASIC25.18■■□□□ 1.62
TTC39BQ5VTQ0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TTC39BQ5VTQ0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TTC39BQ5VTQ0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.17■■□□□ 1.62
TTC39BQ5VTQ0 RAP2CP1-202ENST00000605179 643 ntBASIC25.17■■□□□ 1.62
TTC39BQ5VTQ0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
TTC39BQ5VTQ0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TTC39BQ5VTQ0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms