Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
FNDC3BQ53EP0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
FNDC3BQ53EP0 BX255925.1-201ENST00000566954 1854 ntBASIC24.83■■□□□ 1.56
FNDC3BQ53EP0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
FNDC3BQ53EP0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
FNDC3BQ53EP0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
FNDC3BQ53EP0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
FNDC3BQ53EP0 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.81■■□□□ 1.56
FNDC3BQ53EP0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.81■■□□□ 1.56
FNDC3BQ53EP0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
FNDC3BQ53EP0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
FNDC3BQ53EP0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
FNDC3BQ53EP0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
FNDC3BQ53EP0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
FNDC3BQ53EP0 AC010980.1-201ENST00000587192 1142 ntBASIC24.8■■□□□ 1.56
FNDC3BQ53EP0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.8■■□□□ 1.56
FNDC3BQ53EP0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
FNDC3BQ53EP0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.79■■□□□ 1.56
FNDC3BQ53EP0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
FNDC3BQ53EP0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
FNDC3BQ53EP0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
FNDC3BQ53EP0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
FNDC3BQ53EP0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
FNDC3BQ53EP0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
FNDC3BQ53EP0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
FNDC3BQ53EP0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
FNDC3BQ53EP0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
FNDC3BQ53EP0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
FNDC3BQ53EP0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
FNDC3BQ53EP0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
FNDC3BQ53EP0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.77■■□□□ 1.56
FNDC3BQ53EP0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.77■■□□□ 1.56
FNDC3BQ53EP0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
FNDC3BQ53EP0 AC142086.6-201ENST00000621154 1765 ntBASIC24.76■■□□□ 1.55
FNDC3BQ53EP0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FNDC3BQ53EP0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.76■■□□□ 1.55
FNDC3BQ53EP0 AC074183.2-201ENST00000623112 922 ntBASIC24.76■■□□□ 1.55
FNDC3BQ53EP0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
FNDC3BQ53EP0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
FNDC3BQ53EP0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
FNDC3BQ53EP0 KRT8P33-201ENST00000508125 1423 ntBASIC24.74■■□□□ 1.55
FNDC3BQ53EP0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
FNDC3BQ53EP0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
FNDC3BQ53EP0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.73■■□□□ 1.55
FNDC3BQ53EP0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
FNDC3BQ53EP0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
FNDC3BQ53EP0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
FNDC3BQ53EP0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.73■■□□□ 1.55
FNDC3BQ53EP0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.73■■□□□ 1.55
FNDC3BQ53EP0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.73■■□□□ 1.55
FNDC3BQ53EP0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.73■■□□□ 1.55
FNDC3BQ53EP0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
FNDC3BQ53EP0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
FNDC3BQ53EP0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.72■■□□□ 1.55
FNDC3BQ53EP0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.72■■□□□ 1.55
FNDC3BQ53EP0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.71■■□□□ 1.55
FNDC3BQ53EP0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.71■■□□□ 1.55
FNDC3BQ53EP0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
FNDC3BQ53EP0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
FNDC3BQ53EP0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
FNDC3BQ53EP0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.7■■□□□ 1.54
FNDC3BQ53EP0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
FNDC3BQ53EP0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
FNDC3BQ53EP0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.7■■□□□ 1.54
FNDC3BQ53EP0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.7■■□□□ 1.54
FNDC3BQ53EP0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.7■■□□□ 1.54
FNDC3BQ53EP0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.7■■□□□ 1.54
FNDC3BQ53EP0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
FNDC3BQ53EP0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
FNDC3BQ53EP0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
FNDC3BQ53EP0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FNDC3BQ53EP0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.69■■□□□ 1.54
FNDC3BQ53EP0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FNDC3BQ53EP0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
FNDC3BQ53EP0 AC142472.1-201ENST00000612013 1741 ntBASIC24.69■■□□□ 1.54
FNDC3BQ53EP0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FNDC3BQ53EP0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
FNDC3BQ53EP0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.68■■□□□ 1.54
FNDC3BQ53EP0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
FNDC3BQ53EP0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
FNDC3BQ53EP0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
FNDC3BQ53EP0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
FNDC3BQ53EP0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FNDC3BQ53EP0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FNDC3BQ53EP0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.67■■□□□ 1.54
FNDC3BQ53EP0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FNDC3BQ53EP0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
FNDC3BQ53EP0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.67■■□□□ 1.54
FNDC3BQ53EP0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
FNDC3BQ53EP0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.66■■□□□ 1.54
FNDC3BQ53EP0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
FNDC3BQ53EP0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.66■■□□□ 1.54
FNDC3BQ53EP0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.66■■□□□ 1.54
FNDC3BQ53EP0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.66■■□□□ 1.54
FNDC3BQ53EP0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FNDC3BQ53EP0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FNDC3BQ53EP0 YBX1P4-201ENST00000392794 808 ntBASIC24.65■■□□□ 1.54
FNDC3BQ53EP0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.65■■□□□ 1.54
FNDC3BQ53EP0 AP004609.3-201ENST00000610705 1884 ntBASIC24.65■■□□□ 1.54
FNDC3BQ53EP0 PVT1_1.1-201ENST00000615125 194 ntBASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 753.7 ms