Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CCNYL3P0C7X3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCNYL3P0C7X3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCNYL3P0C7X3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.4■■□□□ 1.34
CCNYL3P0C7X3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCNYL3P0C7X3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.4■■□□□ 1.34
CCNYL3P0C7X3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CCNYL3P0C7X3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCNYL3P0C7X3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCNYL3P0C7X3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.39■■□□□ 1.33
CCNYL3P0C7X3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
CCNYL3P0C7X3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCNYL3P0C7X3 RARRES2P1-201ENST00000474487 481 ntBASIC23.38■■□□□ 1.33
CCNYL3P0C7X3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCNYL3P0C7X3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.37■■□□□ 1.33
CCNYL3P0C7X3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCNYL3P0C7X3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCNYL3P0C7X3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.37■■□□□ 1.33
CCNYL3P0C7X3 BHLHE23-202ENST00000612929 1109 ntBASIC23.37■■□□□ 1.33
CCNYL3P0C7X3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCNYL3P0C7X3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCNYL3P0C7X3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCNYL3P0C7X3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CCNYL3P0C7X3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
CCNYL3P0C7X3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.36■■□□□ 1.33
CCNYL3P0C7X3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.36■■□□□ 1.33
CCNYL3P0C7X3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCNYL3P0C7X3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCNYL3P0C7X3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.35■■□□□ 1.33
CCNYL3P0C7X3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCNYL3P0C7X3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.35■■□□□ 1.33
CCNYL3P0C7X3 RAP2CP1-202ENST00000605179 643 ntBASIC23.35■■□□□ 1.33
CCNYL3P0C7X3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCNYL3P0C7X3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCNYL3P0C7X3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
CCNYL3P0C7X3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCNYL3P0C7X3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
CCNYL3P0C7X3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CCNYL3P0C7X3 DUX4L9-201ENST00000449051 1259 ntBASIC23.34■■□□□ 1.33
CCNYL3P0C7X3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.34■■□□□ 1.33
CCNYL3P0C7X3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCNYL3P0C7X3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCNYL3P0C7X3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCNYL3P0C7X3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCNYL3P0C7X3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CCNYL3P0C7X3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.33■■□□□ 1.33
CCNYL3P0C7X3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CCNYL3P0C7X3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCNYL3P0C7X3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CCNYL3P0C7X3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CCNYL3P0C7X3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNYL3P0C7X3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CCNYL3P0C7X3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNYL3P0C7X3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.32■■□□□ 1.32
CCNYL3P0C7X3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.32■■□□□ 1.32
CCNYL3P0C7X3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.32■■□□□ 1.32
CCNYL3P0C7X3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNYL3P0C7X3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNYL3P0C7X3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNYL3P0C7X3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.31■■□□□ 1.32
CCNYL3P0C7X3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.3■■□□□ 1.32
CCNYL3P0C7X3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.3■■□□□ 1.32
CCNYL3P0C7X3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.3■■□□□ 1.32
CCNYL3P0C7X3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNYL3P0C7X3 AC018755.3-202ENST00000596210 929 ntBASIC23.3■■□□□ 1.32
CCNYL3P0C7X3 AC074183.2-201ENST00000623112 922 ntBASIC23.3■■□□□ 1.32
CCNYL3P0C7X3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNYL3P0C7X3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL3P0C7X3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL3P0C7X3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL3P0C7X3 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.29■■□□□ 1.32
CCNYL3P0C7X3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.29■■□□□ 1.32
CCNYL3P0C7X3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL3P0C7X3 AL359504.2-201ENST00000605506 1601 ntBASIC23.29■■□□□ 1.32
CCNYL3P0C7X3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL3P0C7X3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL3P0C7X3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CCNYL3P0C7X3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNYL3P0C7X3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CCNYL3P0C7X3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNYL3P0C7X3 AC139795.1-202ENST00000500444 432 ntBASIC23.28■■□□□ 1.32
CCNYL3P0C7X3 MIR6765-201ENST00000614092 87 ntBASIC23.28■■□□□ 1.32
CCNYL3P0C7X3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.28■■□□□ 1.32
CCNYL3P0C7X3 WHAMMP3-201ENST00000611636 1609 ntBASIC23.28■■□□□ 1.32
CCNYL3P0C7X3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNYL3P0C7X3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNYL3P0C7X3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL3P0C7X3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL3P0C7X3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL3P0C7X3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CCNYL3P0C7X3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.27■■□□□ 1.32
CCNYL3P0C7X3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL3P0C7X3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNYL3P0C7X3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNYL3P0C7X3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CCNYL3P0C7X3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.26■■□□□ 1.31
CCNYL3P0C7X3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.26■■□□□ 1.31
CCNYL3P0C7X3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.26■■□□□ 1.31
CCNYL3P0C7X3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNYL3P0C7X3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms