Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
MT-CO2P00403 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MT-CO2P00403 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.43■□□□□ 0.7
MT-CO2P00403 AC092803.2-201ENST00000564287 1899 ntBASIC19.43■□□□□ 0.7
MT-CO2P00403 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-CO2P00403 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-CO2P00403 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-CO2P00403 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
MT-CO2P00403 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.42■□□□□ 0.7
MT-CO2P00403 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-CO2P00403 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-CO2P00403 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-CO2P00403 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.41■□□□□ 0.7
MT-CO2P00403 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-CO2P00403 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MT-CO2P00403 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MT-CO2P00403 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-CO2P00403 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-CO2P00403 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-CO2P00403 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-CO2P00403 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MT-CO2P00403 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MT-CO2P00403 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-CO2P00403 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-CO2P00403 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
MT-CO2P00403 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-CO2P00403 AC142472.1-201ENST00000612013 1741 ntBASIC19.39■□□□□ 0.69
MT-CO2P00403 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-CO2P00403 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MT-CO2P00403 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MT-CO2P00403 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.38■□□□□ 0.69
MT-CO2P00403 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.38■□□□□ 0.69
MT-CO2P00403 DUX4L13-201ENST00000554103 1267 ntBASIC19.38■□□□□ 0.69
MT-CO2P00403 DUX4L15-201ENST00000611059 1267 ntBASIC19.38■□□□□ 0.69
MT-CO2P00403 DUX4L23-201ENST00000615195 1269 ntBASIC19.38■□□□□ 0.69
MT-CO2P00403 DUX4L24-201ENST00000617576 1269 ntBASIC19.38■□□□□ 0.69
MT-CO2P00403 DUX4L22-201ENST00000618238 1269 ntBASIC19.38■□□□□ 0.69
MT-CO2P00403 DUX4L20-201ENST00000619712 1269 ntBASIC19.38■□□□□ 0.69
MT-CO2P00403 DUX4L21-201ENST00000622058 1269 ntBASIC19.38■□□□□ 0.69
MT-CO2P00403 DUX4L10-201ENST00000622460 1267 ntBASIC19.38■□□□□ 0.69
MT-CO2P00403 DUX4L25-201ENST00000624915 1269 ntBASIC19.38■□□□□ 0.69
MT-CO2P00403 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MT-CO2P00403 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.37■□□□□ 0.69
MT-CO2P00403 AC093323.1-202ENST00000635031 2045 ntBASIC19.37■□□□□ 0.69
MT-CO2P00403 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
MT-CO2P00403 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MT-CO2P00403 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.37■□□□□ 0.69
MT-CO2P00403 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-CO2P00403 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
MT-CO2P00403 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.37■□□□□ 0.69
MT-CO2P00403 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MT-CO2P00403 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-CO2P00403 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-CO2P00403 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
MT-CO2P00403 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.36■□□□□ 0.69
MT-CO2P00403 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-CO2P00403 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MT-CO2P00403 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.35■□□□□ 0.69
MT-CO2P00403 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.35■□□□□ 0.69
MT-CO2P00403 DUX4L11-201ENST00000611504 1267 ntBASIC19.35■□□□□ 0.69
MT-CO2P00403 DUX4L12-201ENST00000614593 1267 ntBASIC19.35■□□□□ 0.69
MT-CO2P00403 DUX4L14-201ENST00000621227 1267 ntBASIC19.35■□□□□ 0.69
MT-CO2P00403 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-CO2P00403 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-CO2P00403 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-CO2P00403 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.34■□□□□ 0.69
MT-CO2P00403 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MT-CO2P00403 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
MT-CO2P00403 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
MT-CO2P00403 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MT-CO2P00403 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.33■□□□□ 0.69
MT-CO2P00403 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-CO2P00403 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.33■□□□□ 0.68
MT-CO2P00403 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-CO2P00403 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-CO2P00403 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
MT-CO2P00403 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-CO2P00403 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-CO2P00403 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-CO2P00403 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MT-CO2P00403 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-CO2P00403 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-CO2P00403 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-CO2P00403 AC008813.1-201ENST00000536597 885 ntBASIC19.32■□□□□ 0.68
MT-CO2P00403 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MT-CO2P00403 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MT-CO2P00403 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-CO2P00403 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-CO2P00403 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms