Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.61■■□□□ 1.05
TNFSF13O75888 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF13O75888 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.6■■□□□ 1.05
TNFSF13O75888 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF13O75888 RARRES2P1-201ENST00000474487 481 ntBASIC21.6■■□□□ 1.05
TNFSF13O75888 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.6■■□□□ 1.05
TNFSF13O75888 AC018755.3-202ENST00000596210 929 ntBASIC21.6■■□□□ 1.05
TNFSF13O75888 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF13O75888 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF13O75888 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.6■■□□□ 1.05
TNFSF13O75888 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TNFSF13O75888 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TNFSF13O75888 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.59■■□□□ 1.05
TNFSF13O75888 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFSF13O75888 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TNFSF13O75888 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.58■■□□□ 1.05
TNFSF13O75888 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
TNFSF13O75888 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TNFSF13O75888 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFSF13O75888 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TNFSF13O75888 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.57■■□□□ 1.04
TNFSF13O75888 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TNFSF13O75888 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNFSF13O75888 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNFSF13O75888 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.56■■□□□ 1.04
TNFSF13O75888 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TNFSF13O75888 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TNFSF13O75888 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
TNFSF13O75888 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.55■■□□□ 1.04
TNFSF13O75888 BHLHE23-202ENST00000612929 1109 ntBASIC21.55■■□□□ 1.04
TNFSF13O75888 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF13O75888 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF13O75888 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.54■■□□□ 1.04
TNFSF13O75888 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.54■■□□□ 1.04
TNFSF13O75888 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.54■■□□□ 1.04
TNFSF13O75888 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF13O75888 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF13O75888 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF13O75888 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF13O75888 AC010980.1-201ENST00000587192 1142 ntBASIC21.53■■□□□ 1.04
TNFSF13O75888 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF13O75888 AC074183.2-201ENST00000623112 922 ntBASIC21.53■■□□□ 1.04
TNFSF13O75888 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.53■■□□□ 1.04
TNFSF13O75888 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF13O75888 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.53■■□□□ 1.04
TNFSF13O75888 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.52■■□□□ 1.04
TNFSF13O75888 AC142472.1-201ENST00000612013 1741 ntBASIC21.52■■□□□ 1.04
TNFSF13O75888 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFSF13O75888 AC139795.1-202ENST00000500444 432 ntBASIC21.52■■□□□ 1.04
TNFSF13O75888 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNFSF13O75888 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNFSF13O75888 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.51■■□□□ 1.03
TNFSF13O75888 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.51■■□□□ 1.03
TNFSF13O75888 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.51■■□□□ 1.03
TNFSF13O75888 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNFSF13O75888 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNFSF13O75888 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF13O75888 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF13O75888 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TNFSF13O75888 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.5■■□□□ 1.03
TNFSF13O75888 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF13O75888 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF13O75888 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
TNFSF13O75888 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.5■■□□□ 1.03
TNFSF13O75888 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF13O75888 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
TNFSF13O75888 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.49■■□□□ 1.03
TNFSF13O75888 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNFSF13O75888 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TNFSF13O75888 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
TNFSF13O75888 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TNFSF13O75888 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.49■■□□□ 1.03
TNFSF13O75888 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNFSF13O75888 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.48■■□□□ 1.03
TNFSF13O75888 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TNFSF13O75888 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNFSF13O75888 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
TNFSF13O75888 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNFSF13O75888 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.47■■□□□ 1.03
TNFSF13O75888 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TNFSF13O75888 AP004609.3-201ENST00000610705 1884 ntBASIC21.47■■□□□ 1.03
TNFSF13O75888 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNFSF13O75888 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNFSF13O75888 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TNFSF13O75888 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.46■■□□□ 1.03
TNFSF13O75888 PVT1_1.1-201ENST00000615125 194 ntBASIC21.46■■□□□ 1.03
TNFSF13O75888 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.46■■□□□ 1.03
TNFSF13O75888 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.46■■□□□ 1.03
TNFSF13O75888 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.46■■□□□ 1.03
TNFSF13O75888 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TNFSF13O75888 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFSF13O75888 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFSF13O75888 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TNFSF13O75888 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.45■■□□□ 1.02
TNFSF13O75888 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFSF13O75888 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFSF13O75888 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFSF13O75888 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFSF13O75888 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFSF13O75888 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms