Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 AC044849.2-201ENST00000606596 710 ntBASIC16.53■□□□□ 0.24
NDUFA1O15239 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA1O15239 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.52■□□□□ 0.24
NDUFA1O15239 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA1O15239 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA1O15239 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFA1O15239 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFA1O15239 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFA1O15239 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
NDUFA1O15239 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.51■□□□□ 0.23
NDUFA1O15239 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.51■□□□□ 0.23
NDUFA1O15239 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.51■□□□□ 0.23
NDUFA1O15239 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 AL139125.2-201ENST00000623134 1869 ntBASIC16.5■□□□□ 0.23
NDUFA1O15239 AC010501.1-201ENST00000606270 1962 ntBASIC16.5■□□□□ 0.23
NDUFA1O15239 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.5■□□□□ 0.23
NDUFA1O15239 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.5■□□□□ 0.23
NDUFA1O15239 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 AC087741.3-201ENST00000624270 1347 ntBASIC16.49■□□□□ 0.23
NDUFA1O15239 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.49■□□□□ 0.23
NDUFA1O15239 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.49■□□□□ 0.23
NDUFA1O15239 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NDUFA1O15239 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.49■□□□□ 0.23
NDUFA1O15239 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NDUFA1O15239 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA1O15239 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA1O15239 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA1O15239 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA1O15239 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NDUFA1O15239 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.47■□□□□ 0.23
NDUFA1O15239 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NDUFA1O15239 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA1O15239 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA1O15239 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA1O15239 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NDUFA1O15239 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.47■□□□□ 0.23
NDUFA1O15239 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA1O15239 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA1O15239 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.47■□□□□ 0.23
NDUFA1O15239 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
NDUFA1O15239 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NDUFA1O15239 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA1O15239 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFA1O15239 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFA1O15239 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA1O15239 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 AL162393.1-201ENST00000437852 946 ntBASIC16.45■□□□□ 0.22
NDUFA1O15239 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.45■□□□□ 0.22
NDUFA1O15239 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NDUFA1O15239 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 AC138932.3-201ENST00000567634 1902 ntBASIC16.45■□□□□ 0.22
NDUFA1O15239 AC012676.1-201ENST00000574705 1949 ntBASIC16.45■□□□□ 0.22
NDUFA1O15239 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 AC022211.4-201ENST00000625094 2161 ntBASIC16.44■□□□□ 0.22
NDUFA1O15239 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA1O15239 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFA1O15239 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFA1O15239 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA1O15239 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA1O15239 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA1O15239 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA1O15239 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA1O15239 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 215 ms