Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 AC044849.2-201ENST00000606596 710 ntBASIC16.53■□□□□ 0.24
NDUFA1O15239 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA1O15239 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA1O15239 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.52■□□□□ 0.24
NDUFA1O15239 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA1O15239 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA1O15239 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFA1O15239 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFA1O15239 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFA1O15239 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
NDUFA1O15239 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.51■□□□□ 0.23
NDUFA1O15239 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.51■□□□□ 0.23
NDUFA1O15239 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA1O15239 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.51■□□□□ 0.23
NDUFA1O15239 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 AL139125.2-201ENST00000623134 1869 ntBASIC16.5■□□□□ 0.23
NDUFA1O15239 AC010501.1-201ENST00000606270 1962 ntBASIC16.5■□□□□ 0.23
NDUFA1O15239 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.5■□□□□ 0.23
NDUFA1O15239 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.5■□□□□ 0.23
NDUFA1O15239 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA1O15239 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 AC087741.3-201ENST00000624270 1347 ntBASIC16.49■□□□□ 0.23
NDUFA1O15239 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.49■□□□□ 0.23
NDUFA1O15239 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.49■□□□□ 0.23
NDUFA1O15239 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NDUFA1O15239 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.49■□□□□ 0.23
NDUFA1O15239 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NDUFA1O15239 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA1O15239 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA1O15239 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA1O15239 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA1O15239 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA1O15239 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NDUFA1O15239 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.47■□□□□ 0.23
NDUFA1O15239 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NDUFA1O15239 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA1O15239 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA1O15239 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA1O15239 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NDUFA1O15239 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.47■□□□□ 0.23
NDUFA1O15239 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA1O15239 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA1O15239 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.47■□□□□ 0.23
NDUFA1O15239 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
NDUFA1O15239 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NDUFA1O15239 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA1O15239 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFA1O15239 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFA1O15239 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA1O15239 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 AL162393.1-201ENST00000437852 946 ntBASIC16.45■□□□□ 0.22
NDUFA1O15239 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.45■□□□□ 0.22
NDUFA1O15239 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NDUFA1O15239 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 AC138932.3-201ENST00000567634 1902 ntBASIC16.45■□□□□ 0.22
NDUFA1O15239 AC012676.1-201ENST00000574705 1949 ntBASIC16.45■□□□□ 0.22
NDUFA1O15239 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA1O15239 AC022211.4-201ENST00000625094 2161 ntBASIC16.44■□□□□ 0.22
NDUFA1O15239 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA1O15239 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA1O15239 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFA1O15239 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFA1O15239 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA1O15239 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA1O15239 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA1O15239 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA1O15239 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA1O15239 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms