Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 RP9P-202ENST00000450133 1212 ntBASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRAV38-1A0A0B4J264 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV38-1A0A0B4J264 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAV38-1A0A0B4J264 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAV38-1A0A0B4J264 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV38-1A0A0B4J264 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAV38-1A0A0B4J264 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
TRAV38-1A0A0B4J264 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV38-1A0A0B4J264 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV38-1A0A0B4J264 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
TRAV38-1A0A0B4J264 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAV38-1A0A0B4J264 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV38-1A0A0B4J264 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
TRAV38-1A0A0B4J264 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TRAV38-1A0A0B4J264 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
TRAV38-1A0A0B4J264 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 ABHD17AP5-201ENST00000580133 923 ntBASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV38-1A0A0B4J264 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV38-1A0A0B4J264 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV38-1A0A0B4J264 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV38-1A0A0B4J264 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAV38-1A0A0B4J264 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAV38-1A0A0B4J264 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV38-1A0A0B4J264 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV38-1A0A0B4J264 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAV38-1A0A0B4J264 AC093536.1-201ENST00000569153 554 ntBASIC20.42■□□□□ 0.86
TRAV38-1A0A0B4J264 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAV38-1A0A0B4J264 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV38-1A0A0B4J264 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.42■□□□□ 0.86
TRAV38-1A0A0B4J264 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAV38-1A0A0B4J264 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRAV38-1A0A0B4J264 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRAV38-1A0A0B4J264 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TRAV38-1A0A0B4J264 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TRAV38-1A0A0B4J264 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV38-1A0A0B4J264 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV38-1A0A0B4J264 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV38-1A0A0B4J264 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV38-1A0A0B4J264 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAV38-1A0A0B4J264 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV38-1A0A0B4J264 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV38-1A0A0B4J264 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV38-1A0A0B4J264 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRAV38-1A0A0B4J264 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.4■□□□□ 0.86
TRAV38-1A0A0B4J264 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV38-1A0A0B4J264 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAV38-1A0A0B4J264 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV38-1A0A0B4J264 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.39■□□□□ 0.86
TRAV38-1A0A0B4J264 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV38-1A0A0B4J264 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV38-1A0A0B4J264 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.39■□□□□ 0.85
TRAV38-1A0A0B4J264 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV38-1A0A0B4J264 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV38-1A0A0B4J264 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAV38-1A0A0B4J264 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.38■□□□□ 0.85
TRAV38-1A0A0B4J264 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV38-1A0A0B4J264 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
TRAV38-1A0A0B4J264 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV38-1A0A0B4J264 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRAV38-1A0A0B4J264 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV38-1A0A0B4J264 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV38-1A0A0B4J264 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRAV38-1A0A0B4J264 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRAV38-1A0A0B4J264 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRAV38-1A0A0B4J264 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAV38-1A0A0B4J264 AC026202.3-201ENST00000600805 1127 ntBASIC20.37■□□□□ 0.85
TRAV38-1A0A0B4J264 AC133552.2-201ENST00000619106 1032 ntBASIC20.37■□□□□ 0.85
TRAV38-1A0A0B4J264 AC135731.1-201ENST00000569415 2548 ntBASIC20.37■□□□□ 0.85
TRAV38-1A0A0B4J264 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV38-1A0A0B4J264 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TRAV38-1A0A0B4J264 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV38-1A0A0B4J264 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRAV38-1A0A0B4J264 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRAV38-1A0A0B4J264 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.36■□□□□ 0.85
TRAV38-1A0A0B4J264 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV38-1A0A0B4J264 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV38-1A0A0B4J264 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV38-1A0A0B4J264 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV38-1A0A0B4J264 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms