Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAA2-SAA4A0A096LPE2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAA2-SAA4A0A096LPE2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAA2-SAA4A0A096LPE2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAA2-SAA4A0A096LPE2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAA2-SAA4A0A096LPE2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAA2-SAA4A0A096LPE2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAA2-SAA4A0A096LPE2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAA2-SAA4A0A096LPE2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SAA2-SAA4A0A096LPE2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SAA2-SAA4A0A096LPE2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SAA2-SAA4A0A096LPE2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SAA2-SAA4A0A096LPE2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SAA2-SAA4A0A096LPE2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.88■□□□□ 0.77
SAA2-SAA4A0A096LPE2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SAA2-SAA4A0A096LPE2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAA2-SAA4A0A096LPE2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAA2-SAA4A0A096LPE2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAA2-SAA4A0A096LPE2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.88■□□□□ 0.77
SAA2-SAA4A0A096LPE2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAA2-SAA4A0A096LPE2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.87■□□□□ 0.77
SAA2-SAA4A0A096LPE2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SAA2-SAA4A0A096LPE2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SAA2-SAA4A0A096LPE2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
SAA2-SAA4A0A096LPE2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.87■□□□□ 0.77
SAA2-SAA4A0A096LPE2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SAA2-SAA4A0A096LPE2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SAA2-SAA4A0A096LPE2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SAA2-SAA4A0A096LPE2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SAA2-SAA4A0A096LPE2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SAA2-SAA4A0A096LPE2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SAA2-SAA4A0A096LPE2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SAA2-SAA4A0A096LPE2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SAA2-SAA4A0A096LPE2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 ERN1-208ENST00000606895 2068 ntBASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 MIR639-201ENST00000384974 98 ntBASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SAA2-SAA4A0A096LPE2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SAA2-SAA4A0A096LPE2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.83■□□□□ 0.77
SAA2-SAA4A0A096LPE2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.83■□□□□ 0.77
SAA2-SAA4A0A096LPE2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SAA2-SAA4A0A096LPE2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.83■□□□□ 0.76
SAA2-SAA4A0A096LPE2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SAA2-SAA4A0A096LPE2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SAA2-SAA4A0A096LPE2 AC010501.1-201ENST00000606270 1962 ntBASIC19.83■□□□□ 0.76
SAA2-SAA4A0A096LPE2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.82■□□□□ 0.76
SAA2-SAA4A0A096LPE2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SAA2-SAA4A0A096LPE2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SAA2-SAA4A0A096LPE2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SAA2-SAA4A0A096LPE2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SAA2-SAA4A0A096LPE2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SAA2-SAA4A0A096LPE2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SAA2-SAA4A0A096LPE2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SAA2-SAA4A0A096LPE2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAA2-SAA4A0A096LPE2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SAA2-SAA4A0A096LPE2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SAA2-SAA4A0A096LPE2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.8■□□□□ 0.76
SAA2-SAA4A0A096LPE2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAA2-SAA4A0A096LPE2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.8■□□□□ 0.76
SAA2-SAA4A0A096LPE2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.79■□□□□ 0.76
SAA2-SAA4A0A096LPE2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.79■□□□□ 0.76
SAA2-SAA4A0A096LPE2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SAA2-SAA4A0A096LPE2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SAA2-SAA4A0A096LPE2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SAA2-SAA4A0A096LPE2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SAA2-SAA4A0A096LPE2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 AC020928.2-201ENST00000588717 2197 ntBASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.78■□□□□ 0.76
SAA2-SAA4A0A096LPE2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms