Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TNFRSF11AQ9Y6Q6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
TNFRSF11AQ9Y6Q6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TNFRSF11AQ9Y6Q6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.35■■■□□ 2.45
TNFRSF11AQ9Y6Q6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.35■■■□□ 2.45
TNFRSF11AQ9Y6Q6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.35■■■□□ 2.45
TNFRSF11AQ9Y6Q6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
TNFRSF11AQ9Y6Q6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
TNFRSF11AQ9Y6Q6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TNFRSF11AQ9Y6Q6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.34■■■□□ 2.45
TNFRSF11AQ9Y6Q6 AC007029.1-201ENST00000604183 313 ntBASIC30.34■■■□□ 2.45
TNFRSF11AQ9Y6Q6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
TNFRSF11AQ9Y6Q6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TNFRSF11AQ9Y6Q6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
TNFRSF11AQ9Y6Q6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TNFRSF11AQ9Y6Q6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.33■■■□□ 2.45
TNFRSF11AQ9Y6Q6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TNFRSF11AQ9Y6Q6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.32■■■□□ 2.44
TNFRSF11AQ9Y6Q6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TNFRSF11AQ9Y6Q6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
TNFRSF11AQ9Y6Q6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.31■■■□□ 2.44
TNFRSF11AQ9Y6Q6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.31■■■□□ 2.44
TNFRSF11AQ9Y6Q6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
TNFRSF11AQ9Y6Q6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.31■■■□□ 2.44
TNFRSF11AQ9Y6Q6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TNFRSF11AQ9Y6Q6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
TNFRSF11AQ9Y6Q6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
TNFRSF11AQ9Y6Q6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.3■■■□□ 2.44
TNFRSF11AQ9Y6Q6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.3■■■□□ 2.44
TNFRSF11AQ9Y6Q6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TNFRSF11AQ9Y6Q6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TNFRSF11AQ9Y6Q6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TNFRSF11AQ9Y6Q6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
TNFRSF11AQ9Y6Q6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TNFRSF11AQ9Y6Q6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.28■■■□□ 2.44
TNFRSF11AQ9Y6Q6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.28■■■□□ 2.44
TNFRSF11AQ9Y6Q6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
TNFRSF11AQ9Y6Q6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TNFRSF11AQ9Y6Q6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
TNFRSF11AQ9Y6Q6 AC009831.1-201ENST00000580420 1582 ntBASIC30.28■■■□□ 2.44
TNFRSF11AQ9Y6Q6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TNFRSF11AQ9Y6Q6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.27■■■□□ 2.44
TNFRSF11AQ9Y6Q6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.27■■■□□ 2.44
TNFRSF11AQ9Y6Q6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.26■■■□□ 2.44
TNFRSF11AQ9Y6Q6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.26■■■□□ 2.43
TNFRSF11AQ9Y6Q6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
TNFRSF11AQ9Y6Q6 NTF6A-201ENST00000591175 560 ntBASIC30.26■■■□□ 2.43
TNFRSF11AQ9Y6Q6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.25■■■□□ 2.43
TNFRSF11AQ9Y6Q6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.25■■■□□ 2.43
TNFRSF11AQ9Y6Q6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.25■■■□□ 2.43
TNFRSF11AQ9Y6Q6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.25■■■□□ 2.43
TNFRSF11AQ9Y6Q6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TNFRSF11AQ9Y6Q6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TNFRSF11AQ9Y6Q6 AC026202.3-201ENST00000600805 1127 ntBASIC30.24■■■□□ 2.43
TNFRSF11AQ9Y6Q6 AP004609.3-201ENST00000610705 1884 ntBASIC30.24■■■□□ 2.43
TNFRSF11AQ9Y6Q6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TNFRSF11AQ9Y6Q6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TNFRSF11AQ9Y6Q6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
TNFRSF11AQ9Y6Q6 AL121749.1-202ENST00000609313 2153 ntBASIC30.23■■■□□ 2.43
TNFRSF11AQ9Y6Q6 KRT18P60-201ENST00000312876 1297 ntBASIC30.23■■■□□ 2.43
TNFRSF11AQ9Y6Q6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TNFRSF11AQ9Y6Q6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
TNFRSF11AQ9Y6Q6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
TNFRSF11AQ9Y6Q6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
TNFRSF11AQ9Y6Q6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TNFRSF11AQ9Y6Q6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC30.22■■■□□ 2.43
TNFRSF11AQ9Y6Q6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TNFRSF11AQ9Y6Q6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC30.22■■■□□ 2.43
TNFRSF11AQ9Y6Q6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.22■■■□□ 2.43
TNFRSF11AQ9Y6Q6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TNFRSF11AQ9Y6Q6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TNFRSF11AQ9Y6Q6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.21■■■□□ 2.43
TNFRSF11AQ9Y6Q6 AC093536.1-201ENST00000569153 554 ntBASIC30.21■■■□□ 2.43
TNFRSF11AQ9Y6Q6 AC142472.1-201ENST00000612013 1741 ntBASIC30.21■■■□□ 2.43
TNFRSF11AQ9Y6Q6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TNFRSF11AQ9Y6Q6 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.21■■■□□ 2.43
TNFRSF11AQ9Y6Q6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
TNFRSF11AQ9Y6Q6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
TNFRSF11AQ9Y6Q6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
TNFRSF11AQ9Y6Q6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
TNFRSF11AQ9Y6Q6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
TNFRSF11AQ9Y6Q6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.19■■■□□ 2.42
TNFRSF11AQ9Y6Q6 RP9P-202ENST00000450133 1212 ntBASIC30.19■■■□□ 2.42
TNFRSF11AQ9Y6Q6 RAP2CP1-202ENST00000605179 643 ntBASIC30.19■■■□□ 2.42
TNFRSF11AQ9Y6Q6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
TNFRSF11AQ9Y6Q6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TNFRSF11AQ9Y6Q6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
TNFRSF11AQ9Y6Q6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
TNFRSF11AQ9Y6Q6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
TNFRSF11AQ9Y6Q6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
TNFRSF11AQ9Y6Q6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
TNFRSF11AQ9Y6Q6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
TNFRSF11AQ9Y6Q6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
TNFRSF11AQ9Y6Q6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC30.16■■■□□ 2.42
TNFRSF11AQ9Y6Q6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
TNFRSF11AQ9Y6Q6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
TNFRSF11AQ9Y6Q6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
TNFRSF11AQ9Y6Q6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
TNFRSF11AQ9Y6Q6 AL592293.1-201ENST00000502889 1188 ntBASIC30.16■■■□□ 2.42
TNFRSF11AQ9Y6Q6 AC133552.2-201ENST00000619106 1032 ntBASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms