Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CTDP1Q9Y5B0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.48■■■□□ 2.15
CTDP1Q9Y5B0 AC139426.1-201ENST00000568218 2529 ntBASIC28.48■■■□□ 2.15
CTDP1Q9Y5B0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CTDP1Q9Y5B0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.48■■■□□ 2.15
CTDP1Q9Y5B0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.48■■■□□ 2.15
CTDP1Q9Y5B0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CTDP1Q9Y5B0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.47■■■□□ 2.15
CTDP1Q9Y5B0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CTDP1Q9Y5B0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
CTDP1Q9Y5B0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
CTDP1Q9Y5B0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.47■■■□□ 2.15
CTDP1Q9Y5B0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CTDP1Q9Y5B0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CTDP1Q9Y5B0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
CTDP1Q9Y5B0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CTDP1Q9Y5B0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CTDP1Q9Y5B0 RARRES2P1-201ENST00000474487 481 ntBASIC28.45■■■□□ 2.14
CTDP1Q9Y5B0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CTDP1Q9Y5B0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
CTDP1Q9Y5B0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CTDP1Q9Y5B0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CTDP1Q9Y5B0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CTDP1Q9Y5B0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.43■■■□□ 2.14
CTDP1Q9Y5B0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CTDP1Q9Y5B0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.43■■■□□ 2.14
CTDP1Q9Y5B0 AC018755.3-202ENST00000596210 929 ntBASIC28.43■■■□□ 2.14
CTDP1Q9Y5B0 DRD5P2-201ENST00000421395 2012 ntBASIC28.43■■■□□ 2.14
CTDP1Q9Y5B0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
CTDP1Q9Y5B0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CTDP1Q9Y5B0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.42■■■□□ 2.14
CTDP1Q9Y5B0 AC139795.1-202ENST00000500444 432 ntBASIC28.42■■■□□ 2.14
CTDP1Q9Y5B0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
CTDP1Q9Y5B0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CTDP1Q9Y5B0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.41■■■□□ 2.14
CTDP1Q9Y5B0 MIR6765-201ENST00000614092 87 ntBASIC28.41■■■□□ 2.14
CTDP1Q9Y5B0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CTDP1Q9Y5B0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CTDP1Q9Y5B0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
CTDP1Q9Y5B0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.4■■■□□ 2.14
CTDP1Q9Y5B0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CTDP1Q9Y5B0 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.39■■■□□ 2.14
CTDP1Q9Y5B0 SPCS2P3-201ENST00000500401 656 ntBASIC28.39■■■□□ 2.14
CTDP1Q9Y5B0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
CTDP1Q9Y5B0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.39■■■□□ 2.13
CTDP1Q9Y5B0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CTDP1Q9Y5B0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.39■■■□□ 2.13
CTDP1Q9Y5B0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.38■■■□□ 2.13
CTDP1Q9Y5B0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CTDP1Q9Y5B0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.38■■■□□ 2.13
CTDP1Q9Y5B0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
CTDP1Q9Y5B0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CTDP1Q9Y5B0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CTDP1Q9Y5B0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.37■■■□□ 2.13
CTDP1Q9Y5B0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.37■■■□□ 2.13
CTDP1Q9Y5B0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
CTDP1Q9Y5B0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
CTDP1Q9Y5B0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.37■■■□□ 2.13
CTDP1Q9Y5B0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CTDP1Q9Y5B0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC28.36■■■□□ 2.13
CTDP1Q9Y5B0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CTDP1Q9Y5B0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CTDP1Q9Y5B0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.35■■■□□ 2.13
CTDP1Q9Y5B0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
CTDP1Q9Y5B0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
CTDP1Q9Y5B0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.35■■■□□ 2.13
CTDP1Q9Y5B0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
CTDP1Q9Y5B0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
CTDP1Q9Y5B0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CTDP1Q9Y5B0 AC074183.2-201ENST00000623112 922 ntBASIC28.33■■■□□ 2.13
CTDP1Q9Y5B0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.33■■■□□ 2.13
CTDP1Q9Y5B0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
CTDP1Q9Y5B0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
CTDP1Q9Y5B0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CTDP1Q9Y5B0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CTDP1Q9Y5B0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CTDP1Q9Y5B0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.32■■■□□ 2.12
CTDP1Q9Y5B0 AC010980.1-201ENST00000587192 1142 ntBASIC28.32■■■□□ 2.12
CTDP1Q9Y5B0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CTDP1Q9Y5B0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
CTDP1Q9Y5B0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.31■■■□□ 2.12
CTDP1Q9Y5B0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CTDP1Q9Y5B0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
CTDP1Q9Y5B0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.31■■■□□ 2.12
CTDP1Q9Y5B0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.31■■■□□ 2.12
CTDP1Q9Y5B0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CTDP1Q9Y5B0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CTDP1Q9Y5B0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CTDP1Q9Y5B0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.3■■■□□ 2.12
CTDP1Q9Y5B0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.29■■■□□ 2.12
CTDP1Q9Y5B0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CTDP1Q9Y5B0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.28■■■□□ 2.12
CTDP1Q9Y5B0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.28■■■□□ 2.12
CTDP1Q9Y5B0 LINC01003-201ENST00000564834 1764 ntBASIC28.27■■■□□ 2.12
CTDP1Q9Y5B0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CTDP1Q9Y5B0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CTDP1Q9Y5B0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.27■■■□□ 2.12
CTDP1Q9Y5B0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CTDP1Q9Y5B0 KRT8P33-201ENST00000508125 1423 ntBASIC28.26■■■□□ 2.12
CTDP1Q9Y5B0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms