Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.961e-6■■■■□ 25.3
DDX52Q9Y2R4 SDF4-205ENST00000465727 2095 ntTSL 221.83■■□□□ 1.081e-6■■■■□ 25.3
DDX52Q9Y2R4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.081e-6■■■■□ 25.3
DDX52Q9Y2R4 SDF4-203ENST00000403997 728 ntTSL 315.79■□□□□ 0.121e-6■■■■□ 25.3
DDX52Q9Y2R4 CBFA2T3-209ENST00000569443 469 ntTSL 515.18■□□□□ 0.021e-6■■■■□ 25.3
DDX52Q9Y2R4 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC13.96□□□□□ -0.171e-6■■■■□ 25.3
DDX52Q9Y2R4 PLEKHA2-203ENST00000519640 565 ntTSL 522.91■■□□□ 1.268e-15■■■■□ 25.2
DDX52Q9Y2R4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.03■■□□□ 1.128e-15■■■■□ 25.2
DDX52Q9Y2R4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.42■□□□□ 0.78e-15■■■■□ 25.2
DDX52Q9Y2R4 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC12.81□□□□□ -0.368e-15■■■■□ 25.2
DDX52Q9Y2R4 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.378e-15■■■■□ 25.2
DDX52Q9Y2R4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.35■■■□□ 2.292e-7■■■■□ 25.1
DDX52Q9Y2R4 AHDC1-203ENST00000480033 546 ntTSL 521.44■■□□□ 1.024e-6■■■■□ 25
DDX52Q9Y2R4 AHDC1-205ENST00000490295 511 ntTSL 519.47■□□□□ 0.714e-6■■■■□ 25
DDX52Q9Y2R4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.284e-6■■■■□ 25
DDX52Q9Y2R4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.054e-6■■■■□ 25
DDX52Q9Y2R4 NCOR2-223ENST00000542565 746 ntTSL 324.21■■□□□ 1.473e-6■■■■□ 25
DDX52Q9Y2R4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.712e-6■■■■□ 25
DDX52Q9Y2R4 MACROD1-208ENST00000545464 899 ntTSL 328.99■■■□□ 2.232e-6■■■■□ 25
DDX52Q9Y2R4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.97■■□□□ 1.913e-16■■■■□ 24.9
DDX52Q9Y2R4 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)19.2■□□□□ 0.663e-16■■■■□ 24.9
DDX52Q9Y2R4 BRD4-208ENST00000597315 892 ntTSL 531.91■■■□□ 2.73e-11■■■■□ 24.9
DDX52Q9Y2R4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.54■■■□□ 2.323e-11■■■■□ 24.9
DDX52Q9Y2R4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.343e-11■■■■□ 24.9
DDX52Q9Y2R4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.043e-11■■■■□ 24.9
DDX52Q9Y2R4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.792e-6■■■■□ 24.9
DDX52Q9Y2R4 ULK1-205ENST00000541761 1262 ntTSL 218.51■□□□□ 0.552e-6■■■■□ 24.9
DDX52Q9Y2R4 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)16.27■□□□□ 0.23e-11■■■■□ 24.9
DDX52Q9Y2R4 BRD4-210ENST00000601941 604 ntTSL 514.44□□□□□ -0.13e-11■■■■□ 24.9
DDX52Q9Y2R4 CNNM4-204ENST00000496186 748 ntTSL 311.6□□□□□ -0.553e-11■■■■□ 24.9
DDX52Q9Y2R4 AGRN-205ENST00000469403 899 ntTSL 331.43■■■□□ 2.622e-6■■■■□ 24.7
DDX52Q9Y2R4 AGRN-206ENST00000477585 707 ntTSL 328.83■■■□□ 2.212e-6■■■■□ 24.7
DDX52Q9Y2R4 TMC6-204ENST00000585849 552 ntTSL 222.71■■□□□ 1.235e-8■■■■□ 24.7
DDX52Q9Y2R4 EHBP1-204ENST00000405482 1311 ntTSL 226.73■■□□□ 1.875e-10■■■■□ 24.7
DDX52Q9Y2R4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.935e-10■■■■□ 24.7
DDX52Q9Y2R4 EHBP1-205ENST00000413434 533 ntTSL 411.48□□□□□ -0.575e-10■■■■□ 24.7
DDX52Q9Y2R4 EHBP1-217ENST00000472809 1374 ntTSL 511.09□□□□□ -0.635e-10■■■■□ 24.7
DDX52Q9Y2R4 EHBP1-211ENST00000449820 539 ntTSL 510.62□□□□□ -0.715e-10■■■■□ 24.7
DDX52Q9Y2R4 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.735e-10■■■■□ 24.7
DDX52Q9Y2R4 EHBP1-207ENST00000426940 586 ntTSL 49.24□□□□□ -0.935e-10■■■■□ 24.7
DDX52Q9Y2R4 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.92□□□□□ -1.145e-10■■■■□ 24.7
DDX52Q9Y2R4 EHBP1-208ENST00000427809 581 ntTSL 46.31□□□□□ -1.45e-10■■■■□ 24.7
DDX52Q9Y2R4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.515e-10■■■■□ 24.7
DDX52Q9Y2R4 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)5.62□□□□□ -1.515e-10■■■■□ 24.7
DDX52Q9Y2R4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.241e-7■■■■□ 24.6
DDX52Q9Y2R4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.541e-7■■■■□ 24.6
DDX52Q9Y2R4 HOXC6-204ENST00000509328 358 ntTSL 323.96■■□□□ 1.431e-7■■■■□ 24.6
DDX52Q9Y2R4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.521e-7■■■■□ 24.6
DDX52Q9Y2R4 HOXC9-202ENST00000504557 581 ntTSL 316.89■□□□□ 0.291e-7■■■■□ 24.6
DDX52Q9Y2R4 HOXC6-203ENST00000504315 538 ntTSL 316.29■□□□□ 0.21e-7■■■■□ 24.6
DDX52Q9Y2R4 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.83□□□□□ -13e-16■■■■□ 24.6
DDX52Q9Y2R4 MAD1L1-212ENST00000450235 850 ntTSL 320.12■□□□□ 0.813e-6■■■■□ 24.6
DDX52Q9Y2R4 MAD1L1-219ENST00000481633 548 ntTSL 217.17■□□□□ 0.343e-6■■■■□ 24.6
DDX52Q9Y2R4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.032e-11■■■■□ 24.5
DDX52Q9Y2R4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.15■□□□□ 0.022e-11■■■■□ 24.5
DDX52Q9Y2R4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.042e-11■■■■□ 24.5
DDX52Q9Y2R4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.72□□□□□ -0.052e-11■■■■□ 24.5
DDX52Q9Y2R4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.162e-11■■■■□ 24.5
DDX52Q9Y2R4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.162e-11■■■■□ 24.5
DDX52Q9Y2R4 OPA1-214ENST00000482865 567 ntTSL 43.96□□□□□ -1.782e-11■■■■□ 24.5
DDX52Q9Y2R4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.984e-6■■■■□ 24.5
DDX52Q9Y2R4 SLC22A18-210ENST00000492567 684 ntTSL 223.05■■□□□ 1.284e-6■■■■□ 24.5
DDX52Q9Y2R4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.244e-6■■■■□ 24.5
DDX52Q9Y2R4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.024e-6■■■■□ 24.5
DDX52Q9Y2R4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.93■□□□□ 0.784e-6■■■■□ 24.5
DDX52Q9Y2R4 SKI-204ENST00000508416 252 ntTSL 312.53□□□□□ -0.43e-6■■■■□ 24.5
DDX52Q9Y2R4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.616e-6■■■■□ 24.5
DDX52Q9Y2R4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.526e-6■■■■□ 24.5
DDX52Q9Y2R4 EHMT1-237ENST00000637261 4208 ntTSL 511.14□□□□□ -0.636e-6■■■■□ 24.5
DDX52Q9Y2R4 SCARB1-206ENST00000539320 720 ntTSL 226.39■■□□□ 1.821e-7■■■■□ 24.4
DDX52Q9Y2R4 SCARB1-210ENST00000545493 581 ntTSL 225.15■■□□□ 1.621e-7■■■■□ 24.4
DDX52Q9Y2R4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.7■■□□□ 1.541e-7■■■■□ 24.4
DDX52Q9Y2R4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.081e-7■■■■□ 24.4
DDX52Q9Y2R4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.3■□□□□ 0.841e-7■■■■□ 24.4
DDX52Q9Y2R4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.88■□□□□ 0.451e-7■■■■□ 24.4
DDX52Q9Y2R4 SCARB1-205ENST00000538291 5527 ntTSL 517.19■□□□□ 0.341e-7■■■■□ 24.4
DDX52Q9Y2R4 SCARB1-207ENST00000541661 476 ntTSL 515.53■□□□□ 0.081e-7■■■■□ 24.4
DDX52Q9Y2R4 SCARB1-204ENST00000535005 1845 ntTSL 1 (best)14.52□□□□□ -0.081e-7■■■■□ 24.4
DDX52Q9Y2R4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.361e-6■■■■□ 24.4
DDX52Q9Y2R4 CCDC57-207ENST00000419322 2829 ntAPPRIS ALT2 TSL 516.88■□□□□ 0.292e-6■■■■□ 24.4
DDX52Q9Y2R4 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.072e-6■■■■□ 24.4
DDX52Q9Y2R4 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.072e-6■■■■□ 24.4
DDX52Q9Y2R4 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.352e-6■■■■□ 24.4
DDX52Q9Y2R4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.05■□□□□ 0.483e-6■■■■□ 24.3
DDX52Q9Y2R4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.413e-6■■■■□ 24.3
DDX52Q9Y2R4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.143e-6■■■■□ 24.3
DDX52Q9Y2R4 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-6■■■■□ 24.3
DDX52Q9Y2R4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.157e-22■■■■□ 24.3
DDX52Q9Y2R4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.697e-22■■■■□ 24.3
DDX52Q9Y2R4 RNA5SP259-201ENST00000365541 109 ntBASIC1.63□□□□□ -2.157e-22■■■■□ 24.3
DDX52Q9Y2R4 D2HGDH-214ENST00000473126 1612 ntTSL 1 (best)29.13■■■□□ 2.251e-7■■■■□ 24.2
DDX52Q9Y2R4 D2HGDH-215ENST00000486953 2232 ntTSL 1 (best)26.38■■□□□ 1.811e-7■■■■□ 24.2
DDX52Q9Y2R4 VPS28-212ENST00000530836 1613 ntTSL 524.86■■□□□ 1.571e-7■■■■□ 24.2
DDX52Q9Y2R4 VPS28-208ENST00000527797 1609 ntTSL 524.75■■□□□ 1.551e-7■■■■□ 24.2
DDX52Q9Y2R4 VPS28-206ENST00000526734 570 ntTSL 224.49■■□□□ 1.511e-7■■■■□ 24.2
DDX52Q9Y2R4 VPS28-205ENST00000526204 2120 ntTSL 524.25■■□□□ 1.471e-7■■■■□ 24.2
DDX52Q9Y2R4 VPS28-209ENST00000528142 1821 ntTSL 324.22■■□□□ 1.471e-7■■■■□ 24.2
DDX52Q9Y2R4 D2HGDH-211ENST00000467427 555 ntTSL 323.49■■□□□ 1.351e-7■■■■□ 24.2
DDX52Q9Y2R4 D2HGDH-205ENST00000432449 566 ntTSL 523.49■■□□□ 1.351e-7■■■■□ 24.2
DDX52Q9Y2R4 CTBP1-211ENST00000511907 900 ntTSL 322.98■■□□□ 1.271e-7■■■■□ 24.2
Retrieved 100 of 4,483 protein–RNA pairs in 53.6 ms