RNA–Protein interactions for RNA: ENST00000347936.6

SLC22A18-202, Transcript of solute carrier family 22 member 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A18, Length 1,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A18-202ENST00000347936 NISCHQ9Y2I1 1504 aa44.81■■■■■ 4.76
SLC22A18-202ENST00000347936 CCDC180Q9P1Z9 1646 aa39.46■■■■□ 3.91
SLC22A18-202ENST00000347936 ABCC9O60706 1549 aa38.03■■■■□ 3.68
SLC22A18-202ENST00000347936 ZCCHC6Q5VYS8 1495 aaKnown RBP37.54■■■■□ 3.6
SLC22A18-202ENST00000347936 DCAF1Q9Y4B6 1507 aa37.13■■■■□ 3.53
SLC22A18-202ENST00000347936 DCAF8L2P0C7V8 631 aa37.03■■■■□ 3.52
SLC22A18-202ENST00000347936 MYO15BQ96JP2 1530 aa36.91■■■■□ 3.5
SLC22A18-202ENST00000347936 NACADO15069 1562 aa36.85■■■■□ 3.49
SLC22A18-202ENST00000347936 RB1CC1Q8TDY2 1594 aa36.72■■■■□ 3.47
SLC22A18-202ENST00000347936 UNC13AQ9UPW8 1703 aa36.11■■■■□ 3.37
SLC22A18-202ENST00000347936 SHROOM4Q9ULL8 1493 aa36.03■■■■□ 3.36
SLC22A18-202ENST00000347936 SCRIBQ14160 1630 aa36.01■■■■□ 3.36
SLC22A18-202ENST00000347936 DNAJC5BQ9UF47 199 aa35.66■■■■□ 3.3
SLC22A18-202ENST00000347936 BICRAQ9NZM4 1560 aa35.61■■■■□ 3.29
SLC22A18-202ENST00000347936 PABPN1Q86U42 306 aaKnown RBP eCLIP35.43■■■■□ 3.267e-7■■■■□ 25.6
SLC22A18-202ENST00000347936 CECR2Q9BXF3 1484 aa34.79■■■■□ 3.16
SLC22A18-202ENST00000347936 BAZ1AQ9NRL2 1556 aaPredicted RBP34.67■■■■□ 3.14
SLC22A18-202ENST00000347936 EIF4G1Q04637 1599 aaKnown RBP34.59■■■■□ 3.13
SLC22A18-202ENST00000347936 MROH2BQ7Z745 1585 aa34.55■■■■□ 3.12
SLC22A18-202ENST00000347936 SMARCA4P51532 1647 aa34.55■■■■□ 3.12
SLC22A18-202ENST00000347936 RSF1Q96T23 1441 aaPredicted RBP34.53■■■■□ 3.12
SLC22A18-202ENST00000347936 SUPT5HO00267 1087 aaKnown RBP34.45■■■■□ 3.1
SLC22A18-202ENST00000347936 CC2D2AQ9P2K1 1620 aa34.37■■■■□ 3.09
SLC22A18-202ENST00000347936 WIZO95785 1651 aa34.24■■■■□ 3.07
SLC22A18-202ENST00000347936 PEG3Q9GZU2 1588 aa34.21■■■■□ 3.07
SLC22A18-202ENST00000347936 SMARCA2P51531 1590 aa34.11■■■■□ 3.05
SLC22A18-202ENST00000347936 ATAD2BQ9ULI0 1458 aa34.1■■■■□ 3.05
SLC22A18-202ENST00000347936 TOP2AP11388 1531 aaKnown RBP33.94■■■■□ 3.02
SLC22A18-202ENST00000347936 NCAPD3P42695 1498 aa33.93■■■■□ 3.02
SLC22A18-202ENST00000347936 HMGXB3Q12766 1538 aa33.89■■■■□ 3.02
SLC22A18-202ENST00000347936 BAZ1BQ9UIG0 1483 aaKnown RBP33.88■■■■□ 3.01
SLC22A18-202ENST00000347936 CCDC88BA6NC98 1476 aa33.53■■■□□ 2.96
SLC22A18-202ENST00000347936 CFTRP13569 1480 aa33.02■■■□□ 2.88
SLC22A18-202ENST00000347936 LAMC3Q9Y6N6 1575 aa33.01■■■□□ 2.87
SLC22A18-202ENST00000347936 CADPSQ9ULU8 1353 aa33■■■□□ 2.87
SLC22A18-202ENST00000347936 PRDM2Q13029 1718 aa33■■■□□ 2.87
SLC22A18-202ENST00000347936 NESP48681 1621 aa32.89■■■□□ 2.86
SLC22A18-202ENST00000347936 CHIC1Q5VXU3 224 aa32.77■■■□□ 2.84
SLC22A18-202ENST00000347936 ERCC6Q03468 1493 aa32.7■■■□□ 2.82
SLC22A18-202ENST00000347936 KIF21AQ7Z4S6 1674 aa32.69■■■□□ 2.82
SLC22A18-202ENST00000347936 PDS5BQ9NTI5 1447 aa32.65■■■□□ 2.82
SLC22A18-202ENST00000347936 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
SLC22A18-202ENST00000347936 CUX2O14529 1486 aa32.62■■■□□ 2.81
SLC22A18-202ENST00000347936 FANCD2Q9BXW9 1451 aa32.62■■■□□ 2.81
SLC22A18-202ENST00000347936 WRNQ14191 1432 aaPredicted RBP eCLIP32.53■■■□□ 2.8
SLC22A18-202ENST00000347936 TRIM41Q8WV44 630 aa32.49■■■□□ 2.79
SLC22A18-202ENST00000347936 CEP164Q9UPV0 1460 aa32.48■■■□□ 2.79
SLC22A18-202ENST00000347936 DNAJC5Q9H3Z4 198 aa32.47■■■□□ 2.79
SLC22A18-202ENST00000347936 SYNJ1O43426 1573 aa32.39■■■□□ 2.78
SLC22A18-202ENST00000347936 THOC2Q8NI27 1593 aaKnown RBP32.39■■■□□ 2.77
SLC22A18-202ENST00000347936 TOP2BQ02880 1626 aa32.35■■■□□ 2.77
SLC22A18-202ENST00000347936 CUX1P39880 1505 aa32.35■■■□□ 2.77
SLC22A18-202ENST00000347936 BIVM-ERCC5R4GMW8 1640 aa32.35■■■□□ 2.77
SLC22A18-202ENST00000347936 MRC2Q9UBG0 1479 aa32.3■■■□□ 2.76
SLC22A18-202ENST00000347936 DNMBPQ6XZF7 1577 aa32.26■■■□□ 2.76
SLC22A18-202ENST00000347936 WDR62O43379 1518 aa32.24■■■□□ 2.75
SLC22A18-202ENST00000347936 URB2Q14146 1524 aaKnown RBP32.22■■■□□ 2.75
SLC22A18-202ENST00000347936 TOPBP1Q92547 1522 aa32.22■■■□□ 2.75
SLC22A18-202ENST00000347936 FGD5Q6ZNL6 1462 aa32.08■■■□□ 2.73
SLC22A18-202ENST00000347936 POLA1P09884 1462 aaPredicted RBP32.01■■■□□ 2.71
SLC22A18-202ENST00000347936 SOGA1O94964 1423 aa31.9■■■□□ 2.7
SLC22A18-202ENST00000347936 EEA1Q15075 1411 aa31.87■■■□□ 2.69
SLC22A18-202ENST00000347936 RAD54L2Q9Y4B4 1467 aa31.86■■■□□ 2.69
SLC22A18-202ENST00000347936 ABCA10Q8WWZ4 1543 aa31.83■■■□□ 2.69
SLC22A18-202ENST00000347936 TARBP1Q13395 1621 aaKnown RBP31.83■■■□□ 2.69
SLC22A18-202ENST00000347936 WDR97A6NE52 1622 aa31.8■■■□□ 2.68
SLC22A18-202ENST00000347936 RUSC2Q8N2Y8 1516 aa31.8■■■□□ 2.68
SLC22A18-202ENST00000347936 FAM9AQ8IZU1 332 aaPredicted RBP31.79■■■□□ 2.68
SLC22A18-202ENST00000347936 KIF27Q86VH2 1401 aa31.78■■■□□ 2.68
SLC22A18-202ENST00000347936 IFT140Q96RY7 1462 aa31.77■■■□□ 2.68
SLC22A18-202ENST00000347936 CSRNP3Q8WYN3 585 aa31.67■■■□□ 2.66
SLC22A18-202ENST00000347936 ABCA5Q8WWZ7 1642 aa31.61■■■□□ 2.65
SLC22A18-202ENST00000347936 TDRD9Q8NDG6 1382 aaKnown RBP31.59■■■□□ 2.65
SLC22A18-202ENST00000347936 EIF4G3O43432 1585 aaKnown RBP31.56■■■□□ 2.64
SLC22A18-202ENST00000347936 GAPVD1Q14C86 1478 aa31.55■■■□□ 2.64
SLC22A18-202ENST00000347936 ZNF608Q9ULD9 1512 aaPredicted RBP31.55■■■□□ 2.64
SLC22A18-202ENST00000347936 IGF1RP08069 1367 aa31.52■■■□□ 2.64
SLC22A18-202ENST00000347936 PBRM1Q86U86 1689 aa31.49■■■□□ 2.63
SLC22A18-202ENST00000347936 AQRO60306 1485 aaKnown RBP eCLIP31.48■■■□□ 2.631e-7■■■■■ 32.3
SLC22A18-202ENST00000347936 ERICH3Q5RHP9 1530 aa31.47■■■□□ 2.63
SLC22A18-202ENST00000347936 KIF21BO75037 1637 aa31.45■■■□□ 2.62
SLC22A18-202ENST00000347936 PRXQ9BXM0 1461 aa31.43■■■□□ 2.62
SLC22A18-202ENST00000347936 LOC105371045A0A1W2PR82 267 aa31.41■■■□□ 2.62
SLC22A18-202ENST00000347936 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
SLC22A18-202ENST00000347936 CUL7Q14999 1698 aa31.38■■■□□ 2.61
SLC22A18-202ENST00000347936 CARMIL1Q5VZK9 1371 aa31.36■■■□□ 2.61
SLC22A18-202ENST00000347936 GOLGA3Q08378 1498 aa31.36■■■□□ 2.61
SLC22A18-202ENST00000347936 RAPGEF2Q9Y4G8 1499 aa31.3■■■□□ 2.6
SLC22A18-202ENST00000347936 EHMT2Q96KQ7 1210 aa31.28■■■□□ 2.6
SLC22A18-202ENST00000347936 FHAD1B1AJZ9 1412 aa31.22■■■□□ 2.59
SLC22A18-202ENST00000347936 ADAMTS12P58397 1594 aa31.22■■■□□ 2.59
SLC22A18-202ENST00000347936 SNAPC4Q5SXM2 1469 aa31.21■■■□□ 2.59
SLC22A18-202ENST00000347936 MAGI1Q96QZ7 1491 aaPredicted RBP31.21■■■□□ 2.59
SLC22A18-202ENST00000347936 UBTFP17480 764 aaKnown RBP31.18■■■□□ 2.58
SLC22A18-202ENST00000347936 TNIKQ9UKE5 1360 aa31.17■■■□□ 2.58
SLC22A18-202ENST00000347936 OSCARQ8IYS5 282 aa31.13■■■□□ 2.57
SLC22A18-202ENST00000347936 CHD1O14646 1710 aa31.12■■■□□ 2.57
SLC22A18-202ENST00000347936 SYNJ2O15056 1496 aa31.08■■■□□ 2.57
SLC22A18-202ENST00000347936 GRIN2AQ12879 1464 aa31■■■□□ 2.55
SLC22A18-202ENST00000347936 CHMP7Q8WUX9 453 aaPredicted RBP30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms