Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGC3Q9UN70 AL359504.2-201ENST00000605506 1601 ntBASIC26.06■■□□□ 1.76
PCDHGC3Q9UN70 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
PCDHGC3Q9UN70 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGC3Q9UN70 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGC3Q9UN70 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGC3Q9UN70 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.05■■□□□ 1.76
PCDHGC3Q9UN70 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGC3Q9UN70 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PCDHGC3Q9UN70 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHGC3Q9UN70 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
PCDHGC3Q9UN70 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHGC3Q9UN70 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGC3Q9UN70 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHGC3Q9UN70 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC3Q9UN70 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGC3Q9UN70 AL157400.5-201ENST00000507624 621 ntBASIC26.02■■□□□ 1.76
PCDHGC3Q9UN70 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGC3Q9UN70 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGC3Q9UN70 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGC3Q9UN70 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.02■■□□□ 1.76
PCDHGC3Q9UN70 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGC3Q9UN70 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHGC3Q9UN70 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.01■■□□□ 1.75
PCDHGC3Q9UN70 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHGC3Q9UN70 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26■■□□□ 1.75
PCDHGC3Q9UN70 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26■■□□□ 1.75
PCDHGC3Q9UN70 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGC3Q9UN70 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGC3Q9UN70 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGC3Q9UN70 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.99■■□□□ 1.75
PCDHGC3Q9UN70 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGC3Q9UN70 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGC3Q9UN70 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGC3Q9UN70 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGC3Q9UN70 AC092296.2-201ENST00000589470 999 ntBASIC25.98■■□□□ 1.75
PCDHGC3Q9UN70 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGC3Q9UN70 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHGC3Q9UN70 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
PCDHGC3Q9UN70 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGC3Q9UN70 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHGC3Q9UN70 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHGC3Q9UN70 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHGC3Q9UN70 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.97■■□□□ 1.75
PCDHGC3Q9UN70 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHGC3Q9UN70 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHGC3Q9UN70 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGC3Q9UN70 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGC3Q9UN70 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
PCDHGC3Q9UN70 AC022413.1-201ENST00000624602 984 ntBASIC25.96■■□□□ 1.75
PCDHGC3Q9UN70 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGC3Q9UN70 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDHGC3Q9UN70 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHGC3Q9UN70 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGC3Q9UN70 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDHGC3Q9UN70 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGC3Q9UN70 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
PCDHGC3Q9UN70 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHGC3Q9UN70 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHGC3Q9UN70 AC091060.1-201ENST00000623524 1766 ntBASIC25.94■■□□□ 1.74
PCDHGC3Q9UN70 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHGC3Q9UN70 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
PCDHGC3Q9UN70 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.93■■□□□ 1.74
PCDHGC3Q9UN70 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGC3Q9UN70 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGC3Q9UN70 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGC3Q9UN70 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.93■■□□□ 1.74
PCDHGC3Q9UN70 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHGC3Q9UN70 AC025884.2-201ENST00000553429 711 ntBASIC25.92■■□□□ 1.74
PCDHGC3Q9UN70 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
PCDHGC3Q9UN70 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGC3Q9UN70 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
PCDHGC3Q9UN70 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.91■■□□□ 1.74
PCDHGC3Q9UN70 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGC3Q9UN70 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGC3Q9UN70 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGC3Q9UN70 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.89■■□□□ 1.74
PCDHGC3Q9UN70 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHGC3Q9UN70 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHGC3Q9UN70 ECEL1P2-201ENST00000461596 1295 ntBASIC25.89■■□□□ 1.74
PCDHGC3Q9UN70 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.89■■□□□ 1.73
PCDHGC3Q9UN70 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGC3Q9UN70 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.88■■□□□ 1.73
PCDHGC3Q9UN70 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHGC3Q9UN70 AC092803.2-201ENST00000564287 1899 ntBASIC25.88■■□□□ 1.73
PCDHGC3Q9UN70 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
PCDHGC3Q9UN70 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms