Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.31■□□□□ 0.84
SSX3Q99909 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SSX3Q99909 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.31■□□□□ 0.84
SSX3Q99909 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSX3Q99909 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SSX3Q99909 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX3Q99909 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSX3Q99909 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SSX3Q99909 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX3Q99909 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSX3Q99909 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSX3Q99909 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.29■□□□□ 0.84
SSX3Q99909 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SSX3Q99909 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSX3Q99909 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSX3Q99909 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SSX3Q99909 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSX3Q99909 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SSX3Q99909 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSX3Q99909 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSX3Q99909 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.28■□□□□ 0.84
SSX3Q99909 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX3Q99909 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX3Q99909 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SSX3Q99909 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSX3Q99909 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSX3Q99909 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.26■□□□□ 0.83
SSX3Q99909 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSX3Q99909 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.26■□□□□ 0.83
SSX3Q99909 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSX3Q99909 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.26■□□□□ 0.83
SSX3Q99909 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.26■□□□□ 0.83
SSX3Q99909 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SSX3Q99909 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX3Q99909 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX3Q99909 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSX3Q99909 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX3Q99909 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.25■□□□□ 0.83
SSX3Q99909 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX3Q99909 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX3Q99909 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSX3Q99909 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX3Q99909 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSX3Q99909 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX3Q99909 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX3Q99909 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SSX3Q99909 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SSX3Q99909 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSX3Q99909 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.24■□□□□ 0.83
SSX3Q99909 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX3Q99909 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX3Q99909 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX3Q99909 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SSX3Q99909 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSX3Q99909 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSX3Q99909 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSX3Q99909 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX3Q99909 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSX3Q99909 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.23■□□□□ 0.83
SSX3Q99909 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX3Q99909 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.23■□□□□ 0.83
SSX3Q99909 AP002414.2-202ENST00000590929 1450 ntBASIC20.23■□□□□ 0.83
SSX3Q99909 RNF126P1-201ENST00000567452 1320 ntBASIC20.23■□□□□ 0.83
SSX3Q99909 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX3Q99909 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX3Q99909 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.22■□□□□ 0.83
SSX3Q99909 RARRES2P2-201ENST00000394842 485 ntBASIC20.22■□□□□ 0.83
SSX3Q99909 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.22■□□□□ 0.83
SSX3Q99909 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SSX3Q99909 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.21■□□□□ 0.83
SSX3Q99909 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSX3Q99909 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.21■□□□□ 0.83
SSX3Q99909 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSX3Q99909 AC126177.7-201ENST00000547904 679 ntBASIC20.21■□□□□ 0.83
SSX3Q99909 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.21■□□□□ 0.83
SSX3Q99909 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSX3Q99909 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSX3Q99909 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SSX3Q99909 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.2■□□□□ 0.82
SSX3Q99909 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSX3Q99909 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSX3Q99909 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSX3Q99909 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSX3Q99909 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSX3Q99909 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SSX3Q99909 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SSX3Q99909 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SSX3Q99909 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSX3Q99909 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSX3Q99909 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.19■□□□□ 0.82
SSX3Q99909 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSX3Q99909 AC060814.1-201ENST00000554326 538 ntBASIC20.19■□□□□ 0.82
SSX3Q99909 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.19■□□□□ 0.82
SSX3Q99909 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSX3Q99909 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSX3Q99909 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSX3Q99909 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.18■□□□□ 0.82
SSX3Q99909 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.18■□□□□ 0.82
SSX3Q99909 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSX3Q99909 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms