Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC32.08■■■□□ 2.73
ARXQ96QS3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
ARXQ96QS3 SMPD5-203ENST00000639008 1464 ntBASIC32.08■■■□□ 2.73
ARXQ96QS3 AL359258.2-201ENST00000564063 1566 ntBASIC32.07■■■□□ 2.72
ARXQ96QS3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
ARXQ96QS3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
ARXQ96QS3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ARXQ96QS3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ARXQ96QS3 AC008406.3-201ENST00000620001 1374 ntBASIC32.07■■■□□ 2.72
ARXQ96QS3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
ARXQ96QS3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
ARXQ96QS3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ARXQ96QS3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
ARXQ96QS3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
ARXQ96QS3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
ARXQ96QS3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC32.05■■■□□ 2.72
ARXQ96QS3 PVT1_1.1-201ENST00000615125 194 ntBASIC32.05■■■□□ 2.72
ARXQ96QS3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
ARXQ96QS3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32.03■■■□□ 2.72
ARXQ96QS3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
ARXQ96QS3 SPCS2P3-201ENST00000500401 656 ntBASIC32.03■■■□□ 2.72
ARXQ96QS3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ARXQ96QS3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.03■■■□□ 2.72
ARXQ96QS3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
ARXQ96QS3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ARXQ96QS3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ARXQ96QS3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
ARXQ96QS3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
ARXQ96QS3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC32.01■■■□□ 2.71
ARXQ96QS3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.01■■■□□ 2.71
ARXQ96QS3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ARXQ96QS3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC32■■■□□ 2.71
ARXQ96QS3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
ARXQ96QS3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
ARXQ96QS3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
ARXQ96QS3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.99■■■□□ 2.71
ARXQ96QS3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.99■■■□□ 2.71
ARXQ96QS3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
ARXQ96QS3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.99■■■□□ 2.71
ARXQ96QS3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.98■■■□□ 2.71
ARXQ96QS3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ARXQ96QS3 MIR4508-201ENST00000584178 70 ntBASIC31.98■■■□□ 2.71
ARXQ96QS3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ARXQ96QS3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ARXQ96QS3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.97■■■□□ 2.71
ARXQ96QS3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ARXQ96QS3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
ARXQ96QS3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
ARXQ96QS3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
ARXQ96QS3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.96■■■□□ 2.71
ARXQ96QS3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.96■■■□□ 2.71
ARXQ96QS3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ARXQ96QS3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ARXQ96QS3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
ARXQ96QS3 MIR6765-201ENST00000614092 87 ntBASIC31.95■■■□□ 2.71
ARXQ96QS3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ARXQ96QS3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
ARXQ96QS3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
ARXQ96QS3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.94■■■□□ 2.7
ARXQ96QS3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
ARXQ96QS3 AL139393.2-201ENST00000608721 2025 ntBASIC31.93■■■□□ 2.7
ARXQ96QS3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ARXQ96QS3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
ARXQ96QS3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.93■■■□□ 2.7
ARXQ96QS3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.93■■■□□ 2.7
ARXQ96QS3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.93■■■□□ 2.7
ARXQ96QS3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.93■■■□□ 2.7
ARXQ96QS3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
ARXQ96QS3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
ARXQ96QS3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARXQ96QS3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.92■■■□□ 2.7
ARXQ96QS3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.92■■■□□ 2.7
ARXQ96QS3 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.92■■■□□ 2.7
ARXQ96QS3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.91■■■□□ 2.7
ARXQ96QS3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
ARXQ96QS3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ARXQ96QS3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
ARXQ96QS3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
ARXQ96QS3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ARXQ96QS3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
ARXQ96QS3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
ARXQ96QS3 AL031848.2-201ENST00000607670 837 ntBASIC31.9■■■□□ 2.7
ARXQ96QS3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
ARXQ96QS3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.89■■■□□ 2.7
ARXQ96QS3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.89■■■□□ 2.7
ARXQ96QS3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
ARXQ96QS3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.89■■■□□ 2.7
ARXQ96QS3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.89■■■□□ 2.7
ARXQ96QS3 AC103724.3-201ENST00000564481 992 ntBASIC31.89■■■□□ 2.7
ARXQ96QS3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
ARXQ96QS3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ARXQ96QS3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.89■■■□□ 2.7
ARXQ96QS3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.89■■■□□ 2.7
ARXQ96QS3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
ARXQ96QS3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.88■■■□□ 2.69
ARXQ96QS3 RAP2CP1-202ENST00000605179 643 ntBASIC31.88■■■□□ 2.69
ARXQ96QS3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
ARXQ96QS3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
ARXQ96QS3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
ARXQ96QS3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 1385.5 ms