Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ZNF48Q96MX3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ZNF48Q96MX3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF48Q96MX3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF48Q96MX3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
ZNF48Q96MX3 RAP2CP1-202ENST00000605179 643 ntBASIC19.99■□□□□ 0.79
ZNF48Q96MX3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
ZNF48Q96MX3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF48Q96MX3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF48Q96MX3 DUX4L9-201ENST00000449051 1259 ntBASIC19.98■□□□□ 0.79
ZNF48Q96MX3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF48Q96MX3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF48Q96MX3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF48Q96MX3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF48Q96MX3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF48Q96MX3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ZNF48Q96MX3 SPCS2P3-201ENST00000500401 656 ntBASIC19.97■□□□□ 0.79
ZNF48Q96MX3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ZNF48Q96MX3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF48Q96MX3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF48Q96MX3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.96■□□□□ 0.79
ZNF48Q96MX3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF48Q96MX3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF48Q96MX3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF48Q96MX3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF48Q96MX3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ZNF48Q96MX3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF48Q96MX3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF48Q96MX3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ZNF48Q96MX3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ZNF48Q96MX3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF48Q96MX3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF48Q96MX3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ZNF48Q96MX3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF48Q96MX3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF48Q96MX3 MIR3960-201ENST00000583311 91 ntBASIC19.94■□□□□ 0.78
ZNF48Q96MX3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
ZNF48Q96MX3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF48Q96MX3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
ZNF48Q96MX3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF48Q96MX3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF48Q96MX3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF48Q96MX3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ZNF48Q96MX3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.93■□□□□ 0.78
ZNF48Q96MX3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF48Q96MX3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF48Q96MX3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF48Q96MX3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF48Q96MX3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.92■□□□□ 0.78
ZNF48Q96MX3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF48Q96MX3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF48Q96MX3 BX255925.1-201ENST00000566954 1854 ntBASIC19.92■□□□□ 0.78
ZNF48Q96MX3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
ZNF48Q96MX3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF48Q96MX3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF48Q96MX3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ZNF48Q96MX3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF48Q96MX3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF48Q96MX3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ZNF48Q96MX3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF48Q96MX3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
ZNF48Q96MX3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF48Q96MX3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ZNF48Q96MX3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF48Q96MX3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF48Q96MX3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNF48Q96MX3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF48Q96MX3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF48Q96MX3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF48Q96MX3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF48Q96MX3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF48Q96MX3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF48Q96MX3 AL359504.2-201ENST00000605506 1601 ntBASIC19.89■□□□□ 0.77
ZNF48Q96MX3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF48Q96MX3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF48Q96MX3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF48Q96MX3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF48Q96MX3 AC010980.1-201ENST00000587192 1142 ntBASIC19.88■□□□□ 0.77
ZNF48Q96MX3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF48Q96MX3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF48Q96MX3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF48Q96MX3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF48Q96MX3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.87■□□□□ 0.77
ZNF48Q96MX3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF48Q96MX3 BHLHE23-202ENST00000612929 1109 ntBASIC19.87■□□□□ 0.77
ZNF48Q96MX3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.87■□□□□ 0.77
ZNF48Q96MX3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF48Q96MX3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF48Q96MX3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ZNF48Q96MX3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF48Q96MX3 AL451085.2-201ENST00000605085 799 ntBASIC19.86■□□□□ 0.77
ZNF48Q96MX3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF48Q96MX3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF48Q96MX3 MIR6765-201ENST00000614092 87 ntBASIC19.85■□□□□ 0.77
ZNF48Q96MX3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNF48Q96MX3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF48Q96MX3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNF48Q96MX3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ZNF48Q96MX3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF48Q96MX3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms