Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM42Q8IWZ5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM42Q8IWZ5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.3■■□□□ 1.48
TRIM42Q8IWZ5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM42Q8IWZ5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM42Q8IWZ5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.3■■□□□ 1.48
TRIM42Q8IWZ5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.29■■□□□ 1.48
TRIM42Q8IWZ5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM42Q8IWZ5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.29■■□□□ 1.48
TRIM42Q8IWZ5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.29■■□□□ 1.48
TRIM42Q8IWZ5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
TRIM42Q8IWZ5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM42Q8IWZ5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
TRIM42Q8IWZ5 WHAMMP3-201ENST00000611636 1609 ntBASIC24.28■■□□□ 1.48
TRIM42Q8IWZ5 ERN1-208ENST00000606895 2068 ntBASIC24.28■■□□□ 1.48
TRIM42Q8IWZ5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TRIM42Q8IWZ5 MIR6090-201ENST00000622481 60 ntBASIC24.28■■□□□ 1.48
TRIM42Q8IWZ5 DUX4L28-201ENST00000623687 678 ntBASIC24.28■■□□□ 1.48
TRIM42Q8IWZ5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM42Q8IWZ5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.27■■□□□ 1.48
TRIM42Q8IWZ5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM42Q8IWZ5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM42Q8IWZ5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIM42Q8IWZ5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.26■■□□□ 1.47
TRIM42Q8IWZ5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM42Q8IWZ5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
TRIM42Q8IWZ5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM42Q8IWZ5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM42Q8IWZ5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM42Q8IWZ5 AC010501.1-201ENST00000606270 1962 ntBASIC24.25■■□□□ 1.47
TRIM42Q8IWZ5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.24■■□□□ 1.47
TRIM42Q8IWZ5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM42Q8IWZ5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.24■■□□□ 1.47
TRIM42Q8IWZ5 AC142381.3-201ENST00000568208 1670 ntBASIC24.24■■□□□ 1.47
TRIM42Q8IWZ5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
TRIM42Q8IWZ5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM42Q8IWZ5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM42Q8IWZ5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
TRIM42Q8IWZ5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM42Q8IWZ5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.23■■□□□ 1.47
TRIM42Q8IWZ5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.23■■□□□ 1.47
TRIM42Q8IWZ5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM42Q8IWZ5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
TRIM42Q8IWZ5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.22■■□□□ 1.47
TRIM42Q8IWZ5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM42Q8IWZ5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TRIM42Q8IWZ5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM42Q8IWZ5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
TRIM42Q8IWZ5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM42Q8IWZ5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM42Q8IWZ5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.2■■□□□ 1.46
TRIM42Q8IWZ5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
TRIM42Q8IWZ5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.2■■□□□ 1.46
TRIM42Q8IWZ5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM42Q8IWZ5 AC087741.3-201ENST00000624270 1347 ntBASIC24.19■■□□□ 1.46
TRIM42Q8IWZ5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.19■■□□□ 1.46
TRIM42Q8IWZ5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
TRIM42Q8IWZ5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM42Q8IWZ5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM42Q8IWZ5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM42Q8IWZ5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM42Q8IWZ5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM42Q8IWZ5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM42Q8IWZ5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.17■■□□□ 1.46
TRIM42Q8IWZ5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.17■■□□□ 1.46
TRIM42Q8IWZ5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM42Q8IWZ5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.17■■□□□ 1.46
TRIM42Q8IWZ5 AC110285.7-201ENST00000624417 1536 ntBASIC24.16■■□□□ 1.46
TRIM42Q8IWZ5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM42Q8IWZ5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM42Q8IWZ5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM42Q8IWZ5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM42Q8IWZ5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.16■■□□□ 1.46
TRIM42Q8IWZ5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM42Q8IWZ5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.15■■□□□ 1.46
TRIM42Q8IWZ5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM42Q8IWZ5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.15■■□□□ 1.46
TRIM42Q8IWZ5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.15■■□□□ 1.46
TRIM42Q8IWZ5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM42Q8IWZ5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.15■■□□□ 1.46
TRIM42Q8IWZ5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM42Q8IWZ5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.15■■□□□ 1.46
TRIM42Q8IWZ5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRIM42Q8IWZ5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
TRIM42Q8IWZ5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
TRIM42Q8IWZ5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM42Q8IWZ5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM42Q8IWZ5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.13■■□□□ 1.45
TRIM42Q8IWZ5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM42Q8IWZ5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.13■■□□□ 1.45
TRIM42Q8IWZ5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM42Q8IWZ5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM42Q8IWZ5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.12■■□□□ 1.45
TRIM42Q8IWZ5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM42Q8IWZ5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM42Q8IWZ5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM42Q8IWZ5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM42Q8IWZ5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.11■■□□□ 1.45
TRIM42Q8IWZ5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM42Q8IWZ5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms