Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC37.97■■■■□ 3.67
CDC42BPAQ5VT25 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
CDC42BPAQ5VT25 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC37.96■■■■□ 3.67
CDC42BPAQ5VT25 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC37.96■■■■□ 3.67
CDC42BPAQ5VT25 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC37.95■■■■□ 3.67
CDC42BPAQ5VT25 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC37.95■■■■□ 3.67
CDC42BPAQ5VT25 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC37.95■■■■□ 3.67
CDC42BPAQ5VT25 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC37.95■■■■□ 3.67
CDC42BPAQ5VT25 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
CDC42BPAQ5VT25 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC37.95■■■■□ 3.66
CDC42BPAQ5VT25 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC37.94■■■■□ 3.66
CDC42BPAQ5VT25 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
CDC42BPAQ5VT25 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC37.94■■■■□ 3.66
CDC42BPAQ5VT25 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC37.93■■■■□ 3.66
CDC42BPAQ5VT25 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC37.93■■■■□ 3.66
CDC42BPAQ5VT25 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC37.93■■■■□ 3.66
CDC42BPAQ5VT25 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC37.92■■■■□ 3.66
CDC42BPAQ5VT25 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC37.92■■■■□ 3.66
CDC42BPAQ5VT25 GUSBP5-201ENST00000418136 578 ntBASIC37.92■■■■□ 3.66
CDC42BPAQ5VT25 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC37.92■■■■□ 3.66
CDC42BPAQ5VT25 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC37.91■■■■□ 3.66
CDC42BPAQ5VT25 BHLHE23-202ENST00000612929 1109 ntBASIC37.91■■■■□ 3.66
CDC42BPAQ5VT25 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
CDC42BPAQ5VT25 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
CDC42BPAQ5VT25 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
CDC42BPAQ5VT25 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC37.9■■■■□ 3.66
CDC42BPAQ5VT25 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC37.9■■■■□ 3.66
CDC42BPAQ5VT25 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC37.9■■■■□ 3.66
CDC42BPAQ5VT25 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC37.89■■■■□ 3.66
CDC42BPAQ5VT25 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC37.89■■■■□ 3.66
CDC42BPAQ5VT25 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC37.88■■■■□ 3.65
CDC42BPAQ5VT25 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC37.88■■■■□ 3.65
CDC42BPAQ5VT25 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
CDC42BPAQ5VT25 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC37.88■■■■□ 3.65
CDC42BPAQ5VT25 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC37.88■■■■□ 3.65
CDC42BPAQ5VT25 IDNK-201ENST00000376417 511 ntTSL 5 BASIC37.87■■■■□ 3.65
CDC42BPAQ5VT25 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
CDC42BPAQ5VT25 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC37.87■■■■□ 3.65
CDC42BPAQ5VT25 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
CDC42BPAQ5VT25 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
CDC42BPAQ5VT25 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC37.87■■■■□ 3.65
CDC42BPAQ5VT25 HES6-204ENST00000409182 863 ntTSL 2 BASIC37.87■■■■□ 3.65
CDC42BPAQ5VT25 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC37.86■■■■□ 3.65
CDC42BPAQ5VT25 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
CDC42BPAQ5VT25 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC37.86■■■■□ 3.65
CDC42BPAQ5VT25 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC37.86■■■■□ 3.65
CDC42BPAQ5VT25 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
CDC42BPAQ5VT25 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
CDC42BPAQ5VT25 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC37.84■■■■□ 3.65
CDC42BPAQ5VT25 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC37.84■■■■□ 3.65
CDC42BPAQ5VT25 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
CDC42BPAQ5VT25 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC37.83■■■■□ 3.65
CDC42BPAQ5VT25 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
CDC42BPAQ5VT25 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC37.83■■■■□ 3.65
CDC42BPAQ5VT25 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.65
CDC42BPAQ5VT25 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC37.82■■■■□ 3.65
CDC42BPAQ5VT25 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC37.81■■■■□ 3.64
CDC42BPAQ5VT25 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC37.81■■■■□ 3.64
CDC42BPAQ5VT25 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC37.81■■■■□ 3.64
CDC42BPAQ5VT25 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
CDC42BPAQ5VT25 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC37.81■■■■□ 3.64
CDC42BPAQ5VT25 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC37.81■■■■□ 3.64
CDC42BPAQ5VT25 YBX1P4-201ENST00000392794 808 ntBASIC37.81■■■■□ 3.64
CDC42BPAQ5VT25 AL592295.1-201ENST00000400984 884 ntBASIC37.81■■■■□ 3.64
CDC42BPAQ5VT25 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC37.81■■■■□ 3.64
CDC42BPAQ5VT25 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC37.8■■■■□ 3.64
CDC42BPAQ5VT25 PRTG-204ENST00000561292 833 ntTSL 3 BASIC37.8■■■■□ 3.64
CDC42BPAQ5VT25 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC37.8■■■■□ 3.64
CDC42BPAQ5VT25 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC37.8■■■■□ 3.64
CDC42BPAQ5VT25 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
CDC42BPAQ5VT25 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
CDC42BPAQ5VT25 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC37.78■■■■□ 3.64
CDC42BPAQ5VT25 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
CDC42BPAQ5VT25 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC37.78■■■■□ 3.64
CDC42BPAQ5VT25 OR2A1-AS1-204ENST00000470435 602 ntBASIC37.78■■■■□ 3.64
CDC42BPAQ5VT25 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC37.77■■■■□ 3.64
CDC42BPAQ5VT25 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC37.77■■■■□ 3.64
CDC42BPAQ5VT25 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC37.77■■■■□ 3.64
CDC42BPAQ5VT25 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC37.76■■■■□ 3.63
CDC42BPAQ5VT25 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC37.76■■■■□ 3.63
CDC42BPAQ5VT25 PROC-203ENST00000409048 1586 ntTSL 5 BASIC37.76■■■■□ 3.63
CDC42BPAQ5VT25 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
CDC42BPAQ5VT25 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC37.75■■■■□ 3.63
CDC42BPAQ5VT25 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC37.75■■■■□ 3.63
CDC42BPAQ5VT25 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
CDC42BPAQ5VT25 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
CDC42BPAQ5VT25 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC37.73■■■■□ 3.63
CDC42BPAQ5VT25 MTX2-204ENST00000443241 799 ntTSL 3 BASIC37.73■■■■□ 3.63
CDC42BPAQ5VT25 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
CDC42BPAQ5VT25 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
CDC42BPAQ5VT25 AC131212.1-201ENST00000613771 668 ntBASIC37.73■■■■□ 3.63
CDC42BPAQ5VT25 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
CDC42BPAQ5VT25 ABCB10P1-201ENST00000614297 2181 ntBASIC37.72■■■■□ 3.63
CDC42BPAQ5VT25 AC018755.3-202ENST00000596210 929 ntBASIC37.72■■■■□ 3.63
CDC42BPAQ5VT25 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
CDC42BPAQ5VT25 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC37.71■■■■□ 3.63
CDC42BPAQ5VT25 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
CDC42BPAQ5VT25 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC37.71■■■■□ 3.63
CDC42BPAQ5VT25 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
CDC42BPAQ5VT25 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC37.7■■■■□ 3.63
Retrieved 100 of 98,524 protein–RNA pairs in 459.5 ms