Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
H2AFB1P0C5Y9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
H2AFB1P0C5Y9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.74■□□□□ 0.75
H2AFB1P0C5Y9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
H2AFB1P0C5Y9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2AFB1P0C5Y9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
H2AFB1P0C5Y9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2AFB1P0C5Y9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H2AFB1P0C5Y9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2AFB1P0C5Y9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2AFB1P0C5Y9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2AFB1P0C5Y9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2AFB1P0C5Y9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H2AFB1P0C5Y9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H2AFB1P0C5Y9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2AFB1P0C5Y9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2AFB1P0C5Y9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2AFB1P0C5Y9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2AFB1P0C5Y9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H2AFB1P0C5Y9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2AFB1P0C5Y9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H2AFB1P0C5Y9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.71■□□□□ 0.75
H2AFB1P0C5Y9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
H2AFB1P0C5Y9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2AFB1P0C5Y9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
H2AFB1P0C5Y9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
H2AFB1P0C5Y9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2AFB1P0C5Y9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.71■□□□□ 0.75
H2AFB1P0C5Y9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2AFB1P0C5Y9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
H2AFB1P0C5Y9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
H2AFB1P0C5Y9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2AFB1P0C5Y9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.7■□□□□ 0.74
H2AFB1P0C5Y9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
H2AFB1P0C5Y9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2AFB1P0C5Y9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
H2AFB1P0C5Y9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
H2AFB1P0C5Y9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2AFB1P0C5Y9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.69■□□□□ 0.74
H2AFB1P0C5Y9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.69■□□□□ 0.74
H2AFB1P0C5Y9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.69■□□□□ 0.74
H2AFB1P0C5Y9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.68■□□□□ 0.74
H2AFB1P0C5Y9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.68■□□□□ 0.74
H2AFB1P0C5Y9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.68■□□□□ 0.74
H2AFB1P0C5Y9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.68■□□□□ 0.74
H2AFB1P0C5Y9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
H2AFB1P0C5Y9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2AFB1P0C5Y9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2AFB1P0C5Y9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2AFB1P0C5Y9 AC018358.1-201ENST00000631079 1402 ntBASIC19.67■□□□□ 0.74
H2AFB1P0C5Y9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2AFB1P0C5Y9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2AFB1P0C5Y9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H2AFB1P0C5Y9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
H2AFB1P0C5Y9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2AFB1P0C5Y9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
H2AFB1P0C5Y9 AL031258.1-201ENST00000623562 325 ntBASIC19.66■□□□□ 0.74
H2AFB1P0C5Y9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2AFB1P0C5Y9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2AFB1P0C5Y9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
H2AFB1P0C5Y9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2AFB1P0C5Y9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2AFB1P0C5Y9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2AFB1P0C5Y9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2AFB1P0C5Y9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2AFB1P0C5Y9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.64■□□□□ 0.73
H2AFB1P0C5Y9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
H2AFB1P0C5Y9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
H2AFB1P0C5Y9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2AFB1P0C5Y9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2AFB1P0C5Y9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2AFB1P0C5Y9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
H2AFB1P0C5Y9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2AFB1P0C5Y9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2AFB1P0C5Y9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
H2AFB1P0C5Y9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2AFB1P0C5Y9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2AFB1P0C5Y9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2AFB1P0C5Y9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2AFB1P0C5Y9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2AFB1P0C5Y9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
H2AFB1P0C5Y9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2AFB1P0C5Y9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2AFB1P0C5Y9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2AFB1P0C5Y9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2AFB1P0C5Y9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2AFB1P0C5Y9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2AFB1P0C5Y9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2AFB1P0C5Y9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2AFB1P0C5Y9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2AFB1P0C5Y9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
H2AFB1P0C5Y9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
H2AFB1P0C5Y9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
H2AFB1P0C5Y9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
H2AFB1P0C5Y9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
H2AFB1P0C5Y9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
H2AFB1P0C5Y9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.58■□□□□ 0.73
H2AFB1P0C5Y9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.58■□□□□ 0.73
H2AFB1P0C5Y9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
H2AFB1P0C5Y9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms