Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.12■■□□□ 1.61
MT-CO1P00395 AC007029.1-201ENST00000604183 313 ntBASIC25.12■■□□□ 1.61
MT-CO1P00395 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
MT-CO1P00395 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
MT-CO1P00395 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.11■■□□□ 1.61
MT-CO1P00395 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
MT-CO1P00395 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.11■■□□□ 1.61
MT-CO1P00395 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
MT-CO1P00395 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.11■■□□□ 1.61
MT-CO1P00395 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
MT-CO1P00395 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
MT-CO1P00395 NTF6A-201ENST00000591175 560 ntBASIC25.1■■□□□ 1.61
MT-CO1P00395 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
MT-CO1P00395 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
MT-CO1P00395 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
MT-CO1P00395 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
MT-CO1P00395 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.09■■□□□ 1.61
MT-CO1P00395 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
MT-CO1P00395 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.08■■□□□ 1.61
MT-CO1P00395 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.08■■□□□ 1.61
MT-CO1P00395 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.08■■□□□ 1.61
MT-CO1P00395 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
MT-CO1P00395 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
MT-CO1P00395 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
MT-CO1P00395 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.07■■□□□ 1.6
MT-CO1P00395 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
MT-CO1P00395 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
MT-CO1P00395 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
MT-CO1P00395 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
MT-CO1P00395 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
MT-CO1P00395 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.06■■□□□ 1.6
MT-CO1P00395 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.05■■□□□ 1.6
MT-CO1P00395 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
MT-CO1P00395 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.05■■□□□ 1.6
MT-CO1P00395 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
MT-CO1P00395 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
MT-CO1P00395 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.04■■□□□ 1.6
MT-CO1P00395 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.04■■□□□ 1.6
MT-CO1P00395 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
MT-CO1P00395 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.04■■□□□ 1.6
MT-CO1P00395 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
MT-CO1P00395 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.03■■□□□ 1.6
MT-CO1P00395 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.03■■□□□ 1.6
MT-CO1P00395 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.03■■□□□ 1.6
MT-CO1P00395 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
MT-CO1P00395 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
MT-CO1P00395 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
MT-CO1P00395 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.02■■□□□ 1.6
MT-CO1P00395 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
MT-CO1P00395 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
MT-CO1P00395 AC009831.1-201ENST00000580420 1582 ntBASIC25.01■■□□□ 1.59
MT-CO1P00395 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
MT-CO1P00395 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
MT-CO1P00395 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
MT-CO1P00395 RP9P-202ENST00000450133 1212 ntBASIC25■■□□□ 1.59
MT-CO1P00395 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25■■□□□ 1.59
MT-CO1P00395 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
MT-CO1P00395 AC026202.3-201ENST00000600805 1127 ntBASIC25■■□□□ 1.59
MT-CO1P00395 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
MT-CO1P00395 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
MT-CO1P00395 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
MT-CO1P00395 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
MT-CO1P00395 KRT18P60-201ENST00000312876 1297 ntBASIC24.99■■□□□ 1.59
MT-CO1P00395 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
MT-CO1P00395 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.99■■□□□ 1.59
MT-CO1P00395 AC093536.1-201ENST00000569153 554 ntBASIC24.99■■□□□ 1.59
MT-CO1P00395 AC133552.2-201ENST00000619106 1032 ntBASIC24.99■■□□□ 1.59
MT-CO1P00395 AL121749.1-202ENST00000609313 2153 ntBASIC24.98■■□□□ 1.59
MT-CO1P00395 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MT-CO1P00395 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MT-CO1P00395 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MT-CO1P00395 MIR3960-201ENST00000583311 91 ntBASIC24.98■■□□□ 1.59
MT-CO1P00395 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
MT-CO1P00395 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
MT-CO1P00395 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.98■■□□□ 1.59
MT-CO1P00395 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MT-CO1P00395 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
MT-CO1P00395 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
MT-CO1P00395 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MT-CO1P00395 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
MT-CO1P00395 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
MT-CO1P00395 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.97■■□□□ 1.59
MT-CO1P00395 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
MT-CO1P00395 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MT-CO1P00395 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.96■■□□□ 1.59
MT-CO1P00395 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MT-CO1P00395 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
MT-CO1P00395 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
MT-CO1P00395 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
MT-CO1P00395 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.95■■□□□ 1.58
MT-CO1P00395 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
MT-CO1P00395 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
MT-CO1P00395 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.94■■□□□ 1.58
MT-CO1P00395 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.94■■□□□ 1.58
MT-CO1P00395 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
MT-CO1P00395 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
MT-CO1P00395 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
MT-CO1P00395 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.94■■□□□ 1.58
MT-CO1P00395 AL592293.1-201ENST00000502889 1188 ntBASIC24.94■■□□□ 1.58
MT-CO1P00395 RAP2CP1-202ENST00000605179 643 ntBASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms