Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.12■■□□□ 1.61
MT-CO1P00395 AC007029.1-201ENST00000604183 313 ntBASIC25.12■■□□□ 1.61
MT-CO1P00395 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
MT-CO1P00395 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
MT-CO1P00395 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.11■■□□□ 1.61
MT-CO1P00395 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
MT-CO1P00395 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.11■■□□□ 1.61
MT-CO1P00395 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
MT-CO1P00395 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.11■■□□□ 1.61
MT-CO1P00395 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
MT-CO1P00395 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
MT-CO1P00395 NTF6A-201ENST00000591175 560 ntBASIC25.1■■□□□ 1.61
MT-CO1P00395 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
MT-CO1P00395 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
MT-CO1P00395 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
MT-CO1P00395 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
MT-CO1P00395 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.09■■□□□ 1.61
MT-CO1P00395 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
MT-CO1P00395 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.08■■□□□ 1.61
MT-CO1P00395 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.08■■□□□ 1.61
MT-CO1P00395 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.08■■□□□ 1.61
MT-CO1P00395 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
MT-CO1P00395 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
MT-CO1P00395 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
MT-CO1P00395 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.07■■□□□ 1.6
MT-CO1P00395 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
MT-CO1P00395 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
MT-CO1P00395 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
MT-CO1P00395 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
MT-CO1P00395 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
MT-CO1P00395 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.06■■□□□ 1.6
MT-CO1P00395 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.05■■□□□ 1.6
MT-CO1P00395 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
MT-CO1P00395 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.05■■□□□ 1.6
MT-CO1P00395 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
MT-CO1P00395 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
MT-CO1P00395 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.04■■□□□ 1.6
MT-CO1P00395 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.04■■□□□ 1.6
MT-CO1P00395 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
MT-CO1P00395 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.04■■□□□ 1.6
MT-CO1P00395 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
MT-CO1P00395 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.03■■□□□ 1.6
MT-CO1P00395 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.03■■□□□ 1.6
MT-CO1P00395 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.03■■□□□ 1.6
MT-CO1P00395 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
MT-CO1P00395 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
MT-CO1P00395 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
MT-CO1P00395 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.02■■□□□ 1.6
MT-CO1P00395 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
MT-CO1P00395 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
MT-CO1P00395 AC009831.1-201ENST00000580420 1582 ntBASIC25.01■■□□□ 1.59
MT-CO1P00395 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
MT-CO1P00395 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
MT-CO1P00395 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
MT-CO1P00395 RP9P-202ENST00000450133 1212 ntBASIC25■■□□□ 1.59
MT-CO1P00395 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25■■□□□ 1.59
MT-CO1P00395 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
MT-CO1P00395 AC026202.3-201ENST00000600805 1127 ntBASIC25■■□□□ 1.59
MT-CO1P00395 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
MT-CO1P00395 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
MT-CO1P00395 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
MT-CO1P00395 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
MT-CO1P00395 KRT18P60-201ENST00000312876 1297 ntBASIC24.99■■□□□ 1.59
MT-CO1P00395 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
MT-CO1P00395 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.99■■□□□ 1.59
MT-CO1P00395 AC093536.1-201ENST00000569153 554 ntBASIC24.99■■□□□ 1.59
MT-CO1P00395 AC133552.2-201ENST00000619106 1032 ntBASIC24.99■■□□□ 1.59
MT-CO1P00395 AL121749.1-202ENST00000609313 2153 ntBASIC24.98■■□□□ 1.59
MT-CO1P00395 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MT-CO1P00395 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MT-CO1P00395 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MT-CO1P00395 MIR3960-201ENST00000583311 91 ntBASIC24.98■■□□□ 1.59
MT-CO1P00395 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
MT-CO1P00395 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
MT-CO1P00395 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.98■■□□□ 1.59
MT-CO1P00395 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MT-CO1P00395 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
MT-CO1P00395 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
MT-CO1P00395 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MT-CO1P00395 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
MT-CO1P00395 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
MT-CO1P00395 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.97■■□□□ 1.59
MT-CO1P00395 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
MT-CO1P00395 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MT-CO1P00395 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.96■■□□□ 1.59
MT-CO1P00395 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MT-CO1P00395 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
MT-CO1P00395 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
MT-CO1P00395 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
MT-CO1P00395 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.95■■□□□ 1.58
MT-CO1P00395 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
MT-CO1P00395 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
MT-CO1P00395 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.94■■□□□ 1.58
MT-CO1P00395 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.94■■□□□ 1.58
MT-CO1P00395 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
MT-CO1P00395 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
MT-CO1P00395 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
MT-CO1P00395 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.94■■□□□ 1.58
MT-CO1P00395 AL592293.1-201ENST00000502889 1188 ntBASIC24.94■■□□□ 1.58
MT-CO1P00395 RAP2CP1-202ENST00000605179 643 ntBASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms