Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SH2D1AO60880 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D1AO60880 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SH2D1AO60880 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.25■□□□□ 0.51
SH2D1AO60880 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SH2D1AO60880 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SH2D1AO60880 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D1AO60880 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D1AO60880 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D1AO60880 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SH2D1AO60880 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D1AO60880 AC110285.7-201ENST00000624417 1536 ntBASIC18.23■□□□□ 0.51
SH2D1AO60880 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D1AO60880 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.23■□□□□ 0.51
SH2D1AO60880 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D1AO60880 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D1AO60880 AC010501.1-201ENST00000606270 1962 ntBASIC18.22■□□□□ 0.51
SH2D1AO60880 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D1AO60880 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.22■□□□□ 0.51
SH2D1AO60880 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D1AO60880 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D1AO60880 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.22■□□□□ 0.51
SH2D1AO60880 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D1AO60880 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D1AO60880 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D1AO60880 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D1AO60880 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SH2D1AO60880 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D1AO60880 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.21■□□□□ 0.51
SH2D1AO60880 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SH2D1AO60880 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D1AO60880 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D1AO60880 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.21■□□□□ 0.51
SH2D1AO60880 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D1AO60880 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D1AO60880 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D1AO60880 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.2■□□□□ 0.5
SH2D1AO60880 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.2■□□□□ 0.5
SH2D1AO60880 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D1AO60880 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D1AO60880 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D1AO60880 AC142381.3-201ENST00000568208 1670 ntBASIC18.19■□□□□ 0.5
SH2D1AO60880 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D1AO60880 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D1AO60880 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D1AO60880 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.19■□□□□ 0.5
SH2D1AO60880 DUX4L28-201ENST00000623687 678 ntBASIC18.19■□□□□ 0.5
SH2D1AO60880 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SH2D1AO60880 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D1AO60880 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D1AO60880 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D1AO60880 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
SH2D1AO60880 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D1AO60880 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.18■□□□□ 0.5
SH2D1AO60880 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D1AO60880 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.17■□□□□ 0.5
SH2D1AO60880 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D1AO60880 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D1AO60880 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D1AO60880 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D1AO60880 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SH2D1AO60880 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SH2D1AO60880 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D1AO60880 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D1AO60880 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.15■□□□□ 0.5
SH2D1AO60880 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.15■□□□□ 0.5
SH2D1AO60880 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.15■□□□□ 0.5
SH2D1AO60880 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D1AO60880 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SH2D1AO60880 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D1AO60880 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.14■□□□□ 0.49
SH2D1AO60880 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D1AO60880 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.14■□□□□ 0.49
SH2D1AO60880 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D1AO60880 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D1AO60880 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D1AO60880 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D1AO60880 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D1AO60880 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D1AO60880 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.13■□□□□ 0.49
SH2D1AO60880 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D1AO60880 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SH2D1AO60880 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D1AO60880 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D1AO60880 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D1AO60880 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D1AO60880 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D1AO60880 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D1AO60880 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D1AO60880 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D1AO60880 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D1AO60880 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D1AO60880 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D1AO60880 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D1AO60880 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
SH2D1AO60880 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D1AO60880 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D1AO60880 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SH2D1AO60880 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D1AO60880 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms