Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SSSCA1O60232 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSSCA1O60232 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSSCA1O60232 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSSCA1O60232 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSSCA1O60232 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSSCA1O60232 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSSCA1O60232 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.86■□□□□ 0.77
SSSCA1O60232 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.86■□□□□ 0.77
SSSCA1O60232 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SSSCA1O60232 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.86■□□□□ 0.77
SSSCA1O60232 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSSCA1O60232 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSSCA1O60232 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.85■□□□□ 0.77
SSSCA1O60232 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSSCA1O60232 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SSSCA1O60232 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.85■□□□□ 0.77
SSSCA1O60232 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SSSCA1O60232 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSSCA1O60232 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSSCA1O60232 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.84■□□□□ 0.77
SSSCA1O60232 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSSCA1O60232 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
SSSCA1O60232 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSSCA1O60232 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSSCA1O60232 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSSCA1O60232 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSSCA1O60232 AC142381.3-201ENST00000568208 1670 ntBASIC19.84■□□□□ 0.77
SSSCA1O60232 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSSCA1O60232 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSSCA1O60232 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSSCA1O60232 AC136428.2-201ENST00000563187 214 ntBASIC19.83■□□□□ 0.77
SSSCA1O60232 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SSSCA1O60232 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSSCA1O60232 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSSCA1O60232 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSSCA1O60232 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SSSCA1O60232 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSSCA1O60232 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSSCA1O60232 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSSCA1O60232 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSSCA1O60232 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SSSCA1O60232 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSSCA1O60232 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSSCA1O60232 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSSCA1O60232 AC010501.1-201ENST00000606270 1962 ntBASIC19.81■□□□□ 0.76
SSSCA1O60232 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
SSSCA1O60232 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSSCA1O60232 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSSCA1O60232 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSSCA1O60232 AC108673.1-201ENST00000510422 1159 ntBASIC19.8■□□□□ 0.76
SSSCA1O60232 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.8■□□□□ 0.76
SSSCA1O60232 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSSCA1O60232 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSSCA1O60232 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSSCA1O60232 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSSCA1O60232 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSSCA1O60232 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.8■□□□□ 0.76
SSSCA1O60232 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSSCA1O60232 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSSCA1O60232 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.79■□□□□ 0.76
SSSCA1O60232 AC097358.2-201ENST00000607541 1159 ntBASIC19.79■□□□□ 0.76
SSSCA1O60232 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SSSCA1O60232 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
SSSCA1O60232 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.79■□□□□ 0.76
SSSCA1O60232 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SSSCA1O60232 WHAMMP3-201ENST00000611636 1609 ntBASIC19.79■□□□□ 0.76
SSSCA1O60232 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSSCA1O60232 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSSCA1O60232 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSSCA1O60232 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.78■□□□□ 0.76
SSSCA1O60232 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.78■□□□□ 0.76
SSSCA1O60232 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSSCA1O60232 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSSCA1O60232 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SSSCA1O60232 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSSCA1O60232 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
SSSCA1O60232 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSSCA1O60232 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSSCA1O60232 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.76■□□□□ 0.75
SSSCA1O60232 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSSCA1O60232 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSSCA1O60232 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.76■□□□□ 0.75
SSSCA1O60232 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSSCA1O60232 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSSCA1O60232 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SSSCA1O60232 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.75■□□□□ 0.75
SSSCA1O60232 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSSCA1O60232 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSSCA1O60232 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.75■□□□□ 0.75
SSSCA1O60232 MIR6090-201ENST00000622481 60 ntBASIC19.75■□□□□ 0.75
SSSCA1O60232 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSSCA1O60232 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSSCA1O60232 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSSCA1O60232 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSSCA1O60232 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SSSCA1O60232 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.74■□□□□ 0.75
SSSCA1O60232 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.74■□□□□ 0.75
SSSCA1O60232 AC005559.1-201ENST00000589661 871 ntBASIC19.74■□□□□ 0.75
SSSCA1O60232 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms