Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.24■■□□□ 1.63
SHISA7A6NL88 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHISA7A6NL88 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.24■■□□□ 1.63
SHISA7A6NL88 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.24■■□□□ 1.63
SHISA7A6NL88 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.24■■□□□ 1.63
SHISA7A6NL88 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SHISA7A6NL88 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.23■■□□□ 1.63
SHISA7A6NL88 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.23■■□□□ 1.63
SHISA7A6NL88 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SHISA7A6NL88 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SHISA7A6NL88 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SHISA7A6NL88 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.22■■□□□ 1.63
SHISA7A6NL88 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.22■■□□□ 1.63
SHISA7A6NL88 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SHISA7A6NL88 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SHISA7A6NL88 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.21■■□□□ 1.63
SHISA7A6NL88 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SHISA7A6NL88 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SHISA7A6NL88 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SHISA7A6NL88 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
SHISA7A6NL88 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
SHISA7A6NL88 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SHISA7A6NL88 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.2■■□□□ 1.62
SHISA7A6NL88 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.19■■□□□ 1.62
SHISA7A6NL88 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.19■■□□□ 1.62
SHISA7A6NL88 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
SHISA7A6NL88 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SHISA7A6NL88 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHISA7A6NL88 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
SHISA7A6NL88 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.17■■□□□ 1.62
SHISA7A6NL88 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
SHISA7A6NL88 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
SHISA7A6NL88 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHISA7A6NL88 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHISA7A6NL88 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
SHISA7A6NL88 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHISA7A6NL88 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SHISA7A6NL88 AL031848.2-201ENST00000607670 837 ntBASIC25.16■■□□□ 1.62
SHISA7A6NL88 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.15■■□□□ 1.62
SHISA7A6NL88 AL356441.2-201ENST00000443009 864 ntBASIC25.15■■□□□ 1.62
SHISA7A6NL88 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.15■■□□□ 1.62
SHISA7A6NL88 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SHISA7A6NL88 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SHISA7A6NL88 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHISA7A6NL88 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.14■■□□□ 1.62
SHISA7A6NL88 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SHISA7A6NL88 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
SHISA7A6NL88 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.13■■□□□ 1.61
SHISA7A6NL88 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHISA7A6NL88 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SHISA7A6NL88 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.13■■□□□ 1.61
SHISA7A6NL88 AC019171.1-201ENST00000601251 1056 ntBASIC25.13■■□□□ 1.61
SHISA7A6NL88 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHISA7A6NL88 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.13■■□□□ 1.61
SHISA7A6NL88 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.12■■□□□ 1.61
SHISA7A6NL88 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SHISA7A6NL88 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHISA7A6NL88 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SHISA7A6NL88 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHISA7A6NL88 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHISA7A6NL88 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.12■■□□□ 1.61
SHISA7A6NL88 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHISA7A6NL88 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.11■■□□□ 1.61
SHISA7A6NL88 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHISA7A6NL88 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.11■■□□□ 1.61
SHISA7A6NL88 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
SHISA7A6NL88 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHISA7A6NL88 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHISA7A6NL88 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHISA7A6NL88 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.1■■□□□ 1.61
SHISA7A6NL88 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SHISA7A6NL88 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.1■■□□□ 1.61
SHISA7A6NL88 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.1■■□□□ 1.61
SHISA7A6NL88 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.09■■□□□ 1.61
SHISA7A6NL88 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SHISA7A6NL88 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHISA7A6NL88 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SHISA7A6NL88 AC087393.1-201ENST00000582896 145 ntBASIC25.09■■□□□ 1.61
SHISA7A6NL88 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHISA7A6NL88 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHISA7A6NL88 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.09■■□□□ 1.61
SHISA7A6NL88 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
SHISA7A6NL88 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
SHISA7A6NL88 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SHISA7A6NL88 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.08■■□□□ 1.61
SHISA7A6NL88 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
SHISA7A6NL88 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHISA7A6NL88 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHISA7A6NL88 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
SHISA7A6NL88 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHISA7A6NL88 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHISA7A6NL88 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
SHISA7A6NL88 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SHISA7A6NL88 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.05■■□□□ 1.6
SHISA7A6NL88 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHISA7A6NL88 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHISA7A6NL88 AC239859.2-201ENST00000444165 318 ntBASIC25.04■■□□□ 1.6
SHISA7A6NL88 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.04■■□□□ 1.6
SHISA7A6NL88 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.04■■□□□ 1.6
SHISA7A6NL88 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms