Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC38.6■■■■□ 3.77
PLEKHD1A6NEE1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
PLEKHD1A6NEE1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC38.6■■■■□ 3.77
PLEKHD1A6NEE1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
PLEKHD1A6NEE1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
PLEKHD1A6NEE1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
PLEKHD1A6NEE1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC38.59■■■■□ 3.77
PLEKHD1A6NEE1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC38.59■■■■□ 3.77
PLEKHD1A6NEE1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC38.59■■■■□ 3.77
PLEKHD1A6NEE1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC38.59■■■■□ 3.77
PLEKHD1A6NEE1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
PLEKHD1A6NEE1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
PLEKHD1A6NEE1 AL031848.2-201ENST00000607670 837 ntBASIC38.58■■■■□ 3.77
PLEKHD1A6NEE1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
PLEKHD1A6NEE1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
PLEKHD1A6NEE1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC38.57■■■■□ 3.76
PLEKHD1A6NEE1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.76
PLEKHD1A6NEE1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC38.57■■■■□ 3.76
PLEKHD1A6NEE1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
PLEKHD1A6NEE1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC38.56■■■■□ 3.76
PLEKHD1A6NEE1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC38.55■■■■□ 3.76
PLEKHD1A6NEE1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC38.55■■■■□ 3.76
PLEKHD1A6NEE1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC38.55■■■■□ 3.76
PLEKHD1A6NEE1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
PLEKHD1A6NEE1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC38.54■■■■□ 3.76
PLEKHD1A6NEE1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC38.54■■■■□ 3.76
PLEKHD1A6NEE1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
PLEKHD1A6NEE1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC38.53■■■■□ 3.76
PLEKHD1A6NEE1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
PLEKHD1A6NEE1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC38.53■■■■□ 3.76
PLEKHD1A6NEE1 AC019171.1-201ENST00000601251 1056 ntBASIC38.52■■■■□ 3.76
PLEKHD1A6NEE1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC38.52■■■■□ 3.76
PLEKHD1A6NEE1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC38.52■■■■□ 3.76
PLEKHD1A6NEE1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
PLEKHD1A6NEE1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC38.51■■■■□ 3.76
PLEKHD1A6NEE1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC38.51■■■■□ 3.76
PLEKHD1A6NEE1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC38.51■■■■□ 3.76
PLEKHD1A6NEE1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC38.51■■■■□ 3.76
PLEKHD1A6NEE1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC38.5■■■■□ 3.75
PLEKHD1A6NEE1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
PLEKHD1A6NEE1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC38.5■■■■□ 3.75
PLEKHD1A6NEE1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC38.5■■■■□ 3.75
PLEKHD1A6NEE1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC38.49■■■■□ 3.75
PLEKHD1A6NEE1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC38.49■■■■□ 3.75
PLEKHD1A6NEE1 AL356441.2-201ENST00000443009 864 ntBASIC38.49■■■■□ 3.75
PLEKHD1A6NEE1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC38.49■■■■□ 3.75
PLEKHD1A6NEE1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
PLEKHD1A6NEE1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC38.48■■■■□ 3.75
PLEKHD1A6NEE1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
PLEKHD1A6NEE1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
PLEKHD1A6NEE1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC38.48■■■■□ 3.75
PLEKHD1A6NEE1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
PLEKHD1A6NEE1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC38.47■■■■□ 3.75
PLEKHD1A6NEE1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
PLEKHD1A6NEE1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC38.45■■■■□ 3.75
PLEKHD1A6NEE1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC38.45■■■■□ 3.75
PLEKHD1A6NEE1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC38.44■■■■□ 3.74
PLEKHD1A6NEE1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC38.44■■■■□ 3.74
PLEKHD1A6NEE1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
PLEKHD1A6NEE1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC38.43■■■■□ 3.74
PLEKHD1A6NEE1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC38.43■■■■□ 3.74
PLEKHD1A6NEE1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC38.42■■■■□ 3.74
PLEKHD1A6NEE1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC38.42■■■■□ 3.74
PLEKHD1A6NEE1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC38.42■■■■□ 3.74
PLEKHD1A6NEE1 AC087393.1-201ENST00000582896 145 ntBASIC38.42■■■■□ 3.74
PLEKHD1A6NEE1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC38.42■■■■□ 3.74
PLEKHD1A6NEE1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC38.41■■■■□ 3.74
PLEKHD1A6NEE1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
PLEKHD1A6NEE1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC38.41■■■■□ 3.74
PLEKHD1A6NEE1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
PLEKHD1A6NEE1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC38.4■■■■□ 3.74
PLEKHD1A6NEE1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
PLEKHD1A6NEE1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC38.4■■■■□ 3.74
PLEKHD1A6NEE1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC38.4■■■■□ 3.74
PLEKHD1A6NEE1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
PLEKHD1A6NEE1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC38.39■■■■□ 3.74
PLEKHD1A6NEE1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC38.39■■■■□ 3.74
PLEKHD1A6NEE1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC38.38■■■■□ 3.74
PLEKHD1A6NEE1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC38.38■■■■□ 3.73
PLEKHD1A6NEE1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC38.37■■■■□ 3.73
PLEKHD1A6NEE1 AC239859.2-201ENST00000444165 318 ntBASIC38.37■■■■□ 3.73
PLEKHD1A6NEE1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
PLEKHD1A6NEE1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
PLEKHD1A6NEE1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC38.37■■■■□ 3.73
PLEKHD1A6NEE1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC38.37■■■■□ 3.73
PLEKHD1A6NEE1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
PLEKHD1A6NEE1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
PLEKHD1A6NEE1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
PLEKHD1A6NEE1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC38.36■■■■□ 3.73
PLEKHD1A6NEE1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC38.36■■■■□ 3.73
PLEKHD1A6NEE1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC38.36■■■■□ 3.73
PLEKHD1A6NEE1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC38.36■■■■□ 3.73
PLEKHD1A6NEE1 WHAMMP3-201ENST00000611636 1609 ntBASIC38.35■■■■□ 3.73
PLEKHD1A6NEE1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
PLEKHD1A6NEE1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC38.35■■■■□ 3.73
PLEKHD1A6NEE1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC38.34■■■■□ 3.73
PLEKHD1A6NEE1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC38.33■■■■□ 3.73
PLEKHD1A6NEE1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
PLEKHD1A6NEE1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC38.33■■■■□ 3.73
PLEKHD1A6NEE1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC38.32■■■■□ 3.73
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms