Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV7-9A0A0J9YWB2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRBV7-9A0A0J9YWB2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRBV7-9A0A0J9YWB2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV7-9A0A0J9YWB2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV7-9A0A0J9YWB2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV7-9A0A0J9YWB2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV7-9A0A0J9YWB2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRBV7-9A0A0J9YWB2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV7-9A0A0J9YWB2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV7-9A0A0J9YWB2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-9A0A0J9YWB2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRBV7-9A0A0J9YWB2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-9A0A0J9YWB2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRBV7-9A0A0J9YWB2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-9A0A0J9YWB2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV7-9A0A0J9YWB2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-9A0A0J9YWB2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV7-9A0A0J9YWB2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBV7-9A0A0J9YWB2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV7-9A0A0J9YWB2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV7-9A0A0J9YWB2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRBV7-9A0A0J9YWB2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
TRBV7-9A0A0J9YWB2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV7-9A0A0J9YWB2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 DUX4L13-201ENST00000554103 1267 ntBASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 DUX4L15-201ENST00000611059 1267 ntBASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 DUX4L23-201ENST00000615195 1269 ntBASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 DUX4L24-201ENST00000617576 1269 ntBASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 DUX4L22-201ENST00000618238 1269 ntBASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 DUX4L20-201ENST00000619712 1269 ntBASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 DUX4L21-201ENST00000622058 1269 ntBASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 DUX4L10-201ENST00000622460 1267 ntBASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 AC148477.6-201ENST00000623746 465 ntBASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 DUX4L25-201ENST00000624915 1269 ntBASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV7-9A0A0J9YWB2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRBV7-9A0A0J9YWB2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.15■□□□□ 0.5
TRBV7-9A0A0J9YWB2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV7-9A0A0J9YWB2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV7-9A0A0J9YWB2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV7-9A0A0J9YWB2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBV7-9A0A0J9YWB2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 AC020928.2-201ENST00000588717 2197 ntBASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-9A0A0J9YWB2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV7-9A0A0J9YWB2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV7-9A0A0J9YWB2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.13■□□□□ 0.49
TRBV7-9A0A0J9YWB2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.13■□□□□ 0.49
TRBV7-9A0A0J9YWB2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV7-9A0A0J9YWB2 AC010501.1-201ENST00000606270 1962 ntBASIC18.13■□□□□ 0.49
TRBV7-9A0A0J9YWB2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV7-9A0A0J9YWB2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV7-9A0A0J9YWB2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV7-9A0A0J9YWB2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV7-9A0A0J9YWB2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.12■□□□□ 0.49
TRBV7-9A0A0J9YWB2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV7-9A0A0J9YWB2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV7-9A0A0J9YWB2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV7-9A0A0J9YWB2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV7-9A0A0J9YWB2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRBV7-9A0A0J9YWB2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV7-9A0A0J9YWB2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV7-9A0A0J9YWB2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV7-9A0A0J9YWB2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV7-9A0A0J9YWB2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRBV7-9A0A0J9YWB2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRBV7-9A0A0J9YWB2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV7-9A0A0J9YWB2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV7-9A0A0J9YWB2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV7-9A0A0J9YWB2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV7-9A0A0J9YWB2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV7-9A0A0J9YWB2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV7-9A0A0J9YWB2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV7-9A0A0J9YWB2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV7-9A0A0J9YWB2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV7-9A0A0J9YWB2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV7-9A0A0J9YWB2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV7-9A0A0J9YWB2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV7-9A0A0J9YWB2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.08■□□□□ 0.49
TRBV7-9A0A0J9YWB2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV7-9A0A0J9YWB2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV7-9A0A0J9YWB2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV7-9A0A0J9YWB2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV7-9A0A0J9YWB2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV7-9A0A0J9YWB2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms