Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV38-1A0A0B4J264 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV38-1A0A0B4J264 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV38-1A0A0B4J264 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRAV38-1A0A0B4J264 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAV38-1A0A0B4J264 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV38-1A0A0B4J264 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAV38-1A0A0B4J264 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAV38-1A0A0B4J264 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV38-1A0A0B4J264 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV38-1A0A0B4J264 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TRAV38-1A0A0B4J264 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV38-1A0A0B4J264 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV38-1A0A0B4J264 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV38-1A0A0B4J264 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAV38-1A0A0B4J264 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAV38-1A0A0B4J264 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV38-1A0A0B4J264 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV38-1A0A0B4J264 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRAV38-1A0A0B4J264 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAV38-1A0A0B4J264 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV38-1A0A0B4J264 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAV38-1A0A0B4J264 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV38-1A0A0B4J264 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAV38-1A0A0B4J264 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV38-1A0A0B4J264 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV38-1A0A0B4J264 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV38-1A0A0B4J264 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV38-1A0A0B4J264 SMPD5-203ENST00000639008 1464 ntBASIC20.6■□□□□ 0.89
TRAV38-1A0A0B4J264 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV38-1A0A0B4J264 AL359504.2-201ENST00000605506 1601 ntBASIC20.6■□□□□ 0.89
TRAV38-1A0A0B4J264 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV38-1A0A0B4J264 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV38-1A0A0B4J264 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV38-1A0A0B4J264 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV38-1A0A0B4J264 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAV38-1A0A0B4J264 AL121749.1-202ENST00000609313 2153 ntBASIC20.59■□□□□ 0.89
TRAV38-1A0A0B4J264 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV38-1A0A0B4J264 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAV38-1A0A0B4J264 AC142472.1-201ENST00000612013 1741 ntBASIC20.58■□□□□ 0.89
TRAV38-1A0A0B4J264 AP004609.3-201ENST00000610705 1884 ntBASIC20.58■□□□□ 0.89
TRAV38-1A0A0B4J264 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV38-1A0A0B4J264 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
TRAV38-1A0A0B4J264 RARRES2P2-201ENST00000394842 485 ntBASIC20.58■□□□□ 0.89
TRAV38-1A0A0B4J264 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAV38-1A0A0B4J264 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
TRAV38-1A0A0B4J264 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV38-1A0A0B4J264 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV38-1A0A0B4J264 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV38-1A0A0B4J264 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV38-1A0A0B4J264 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV38-1A0A0B4J264 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV38-1A0A0B4J264 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV38-1A0A0B4J264 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.56■□□□□ 0.88
TRAV38-1A0A0B4J264 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.56■□□□□ 0.88
TRAV38-1A0A0B4J264 AC025884.2-201ENST00000553429 711 ntBASIC20.56■□□□□ 0.88
TRAV38-1A0A0B4J264 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV38-1A0A0B4J264 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV38-1A0A0B4J264 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV38-1A0A0B4J264 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV38-1A0A0B4J264 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV38-1A0A0B4J264 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAV38-1A0A0B4J264 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV38-1A0A0B4J264 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.54■□□□□ 0.88
TRAV38-1A0A0B4J264 MIR3960-201ENST00000583311 91 ntBASIC20.54■□□□□ 0.88
TRAV38-1A0A0B4J264 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAV38-1A0A0B4J264 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV38-1A0A0B4J264 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV38-1A0A0B4J264 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV38-1A0A0B4J264 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV38-1A0A0B4J264 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.53■□□□□ 0.88
TRAV38-1A0A0B4J264 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV38-1A0A0B4J264 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV38-1A0A0B4J264 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV38-1A0A0B4J264 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV38-1A0A0B4J264 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV38-1A0A0B4J264 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV38-1A0A0B4J264 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRAV38-1A0A0B4J264 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV38-1A0A0B4J264 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.51■□□□□ 0.87
TRAV38-1A0A0B4J264 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV38-1A0A0B4J264 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV38-1A0A0B4J264 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRAV38-1A0A0B4J264 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV38-1A0A0B4J264 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV38-1A0A0B4J264 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV38-1A0A0B4J264 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.5■□□□□ 0.87
TRAV38-1A0A0B4J264 AC007029.1-201ENST00000604183 313 ntBASIC20.5■□□□□ 0.87
TRAV38-1A0A0B4J264 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV38-1A0A0B4J264 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRAV38-1A0A0B4J264 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV38-1A0A0B4J264 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV38-1A0A0B4J264 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
TRAV38-1A0A0B4J264 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV38-1A0A0B4J264 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV38-1A0A0B4J264 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV38-1A0A0B4J264 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV38-1A0A0B4J264 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRAV38-1A0A0B4J264 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV38-1A0A0B4J264 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms