Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV10A0A0B4J240 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRAV10A0A0B4J240 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV10A0A0B4J240 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRAV10A0A0B4J240 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV10A0A0B4J240 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV10A0A0B4J240 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRAV10A0A0B4J240 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
TRAV10A0A0B4J240 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAV10A0A0B4J240 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRAV10A0A0B4J240 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV10A0A0B4J240 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV10A0A0B4J240 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV10A0A0B4J240 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV10A0A0B4J240 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
TRAV10A0A0B4J240 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.32■□□□□ 0.36
TRAV10A0A0B4J240 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV10A0A0B4J240 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV10A0A0B4J240 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV10A0A0B4J240 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV10A0A0B4J240 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRAV10A0A0B4J240 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV10A0A0B4J240 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV10A0A0B4J240 DUX4L9-201ENST00000449051 1259 ntBASIC17.31■□□□□ 0.36
TRAV10A0A0B4J240 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV10A0A0B4J240 AC018755.3-202ENST00000596210 929 ntBASIC17.31■□□□□ 0.36
TRAV10A0A0B4J240 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV10A0A0B4J240 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV10A0A0B4J240 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV10A0A0B4J240 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV10A0A0B4J240 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 BHLHE23-202ENST00000612929 1109 ntBASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 MIR6765-201ENST00000614092 87 ntBASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 DRD5P2-201ENST00000421395 2012 ntBASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TRAV10A0A0B4J240 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV10A0A0B4J240 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV10A0A0B4J240 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV10A0A0B4J240 AC139795.1-202ENST00000500444 432 ntBASIC17.28■□□□□ 0.36
TRAV10A0A0B4J240 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV10A0A0B4J240 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV10A0A0B4J240 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV10A0A0B4J240 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV10A0A0B4J240 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV10A0A0B4J240 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.27■□□□□ 0.36
TRAV10A0A0B4J240 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV10A0A0B4J240 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV10A0A0B4J240 AC074183.2-201ENST00000623112 922 ntBASIC17.27■□□□□ 0.36
TRAV10A0A0B4J240 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV10A0A0B4J240 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV10A0A0B4J240 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV10A0A0B4J240 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV10A0A0B4J240 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV10A0A0B4J240 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV10A0A0B4J240 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV10A0A0B4J240 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV10A0A0B4J240 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV10A0A0B4J240 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV10A0A0B4J240 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV10A0A0B4J240 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV10A0A0B4J240 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV10A0A0B4J240 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV10A0A0B4J240 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRAV10A0A0B4J240 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV10A0A0B4J240 RARRES2P1-201ENST00000474487 481 ntBASIC17.24■□□□□ 0.35
TRAV10A0A0B4J240 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV10A0A0B4J240 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV10A0A0B4J240 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV10A0A0B4J240 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV10A0A0B4J240 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV10A0A0B4J240 LINC01003-201ENST00000564834 1764 ntBASIC17.23■□□□□ 0.35
TRAV10A0A0B4J240 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV10A0A0B4J240 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAV10A0A0B4J240 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV10A0A0B4J240 SPCS2P3-201ENST00000500401 656 ntBASIC17.23■□□□□ 0.35
TRAV10A0A0B4J240 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAV10A0A0B4J240 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV10A0A0B4J240 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV10A0A0B4J240 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV10A0A0B4J240 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV10A0A0B4J240 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV10A0A0B4J240 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV10A0A0B4J240 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV10A0A0B4J240 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
TRAV10A0A0B4J240 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV10A0A0B4J240 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV10A0A0B4J240 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRAV10A0A0B4J240 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV10A0A0B4J240 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV10A0A0B4J240 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV10A0A0B4J240 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 317.3 ms