Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
MSANTD3-TMEFF1A0A0A6YYJ0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 GUSBP5-201ENST00000418136 578 ntBASIC24.57■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.57■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.56■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.55■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.55■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 AC103724.3-201ENST00000564481 992 ntBASIC24.55■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.53■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.53■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.52■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.52■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 AL031848.2-201ENST00000607670 837 ntBASIC24.52■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
MSANTD3-TMEFF1A0A0A6YYJ0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.51■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.51■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.51■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.5■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 AC019069.1-201ENST00000610008 1333 ntBASIC24.5■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.5■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.49■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.48■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.48■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
MSANTD3-TMEFF1A0A0A6YYJ0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 WHAMMP3-201ENST00000611636 1609 ntBASIC24.45■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.44■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.44■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.43■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 AL356441.2-201ENST00000443009 864 ntBASIC24.43■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.43■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.42■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.42■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.42■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 AC239859.2-201ENST00000444165 318 ntBASIC24.41■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.4■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.4■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.4■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.4■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
MSANTD3-TMEFF1A0A0A6YYJ0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 AC019171.1-201ENST00000601251 1056 ntBASIC24.39■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
MSANTD3-TMEFF1A0A0A6YYJ0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms